Gene Tgr7_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0981 
Symbol 
ID7315012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1060539 
End bp1062452 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content64% 
IMG OID643615866 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002513056 
Protein GI220934157 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.38316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGACT TGGTCAAAAA CCTGATTATC TGGGCGGTCA TTGCCGTGGT GCTGATGTCC 
GTGTTCAACA ACTTCAGCCC GCGCACGTCG ACGCCGCAGT CCCTGTCCTA TTCCCAGTTC
ATCAGCGAAG TGAAGAGCGG GCGCATCAAG AGCGTCTACA TCGAGAACAA CACCATCGAG
GGGCGCACCA TCAACGGTGA GCGCTTCACC ACCTACAGCC CCAACGATCC GGGCCTGATC
GGTGACCTGC TGAACAACAA CGTGGAGATC CTGGCCCAGG AGCCCCAGCG TCGTTCCCTG
CTGATGGACA TCCTGATCAG CTGGTTCCCG ATGCTGCTTC TGATCGGTGT GTGGATCTAC
TTCATGCGTC AGATGCAGGG CGGGGCCGGT GGCCGGGGGG CCATGTCCTT CGGCAAGAGC
AAGGCCAAGA TGATGAGCGA GGACCAGGTC AAGGTCACCT TCGCCGATGT GGCCGGCTGC
GACGAGGCCA AGGAAGAGGT GGCCGAGCTG GTGGAATTCC TGCGCGATCC CAGCAAGTTC
CAGAAACTTG GCGGCAAGAT TCCCCGTGGT GTGCTCATGG TCGGTTCCCC GGGTACCGGT
AAGACCCTGC TGGCCAAGGC CATCGCCGGC GAGGCCAAGG TGCCCTTCTT CAGCATCTCC
GGCTCCGACT TCGTGGAGAT GTTCGTGGGC GTGGGCGCCA GCCGCGTGCG CGACATGTTC
GACCAGGGCA AGAAGCACGC CCCCTGCATC ATCTTCATCG ACGAGATCGA CGCCGTGGGC
CGCCACCGTG GCGCAGGTCT GGGCGGCGGT CACGACGAGC GCGAGCAGAC CCTGAACCAG
CTGCTGGTGG AGATGGATGG CTTCGAGGGC ACCGAGGGCG TGATCGTGAT CGCCGCCACC
AACCGTCCCG ACGTACTCGA CCCGGCGCTG CTGCGTCCCG GCCGCTTCGA CCGCCAGGTG
GTGGTGCCCC TGCCGGACGT GCGCGGCCGC GAGCAGATCC TCAAGGTGCA CATGCGCAAG
GTGCCCCTGG CCGAGAACGT GCGCCCGGAC CTCATCGCCC GAGGCACCCC CGGTTTCTCG
GGTGCGGACC TGGCCAACCT GGTCAACGAG GCGGCCCTGT TCGCCGCCCG GGGCAACAAG
CGCCTGGTGG ACATGCACGA TTTCGAGCGC GCCAAGGACA AGATCATGAT GGGCGCCGAG
CGCAAGTCCA TGGTCATGAA CGACGCGGAG AAGAAGCTCA CCGCCTACCA CGAGGCTGGT
CACGCCATCG TTGGTCGCCT GGTGCCCGAG CACGACCCGG TCTACAAGGT GAGCATCATT
CCCCGCGGCC GCGCCCTGGG TGTGACCATG TTCCTGCCCG AGGAGGACCG CTACAGCCAC
AGCAAGACCC GGCTTGAGAG CCAGATCTGC TCCCTGTTCG GCGGGCGTAT CGCCGAAGAG
ATCATCTTCG GCTCCGACAA GGTCACCACC GGTGCCTCCA ATGACATCGA GCGGGCCACC
GCCATTGCCC GCAACATGGT GACCAAGTGG GGCCTGTCCG ATCGCCTCGG GCCGCTGTCC
TACAGCGAGG ACGAGGGCGA GGTGTTCCTG GGCCGCCAGG TGACCCAGCA CAAGCACATG
TCCGACGAGA CGGCCCATGC CATCGACGAG GAGATCCGGC GCGTGATCGA TACCAGCTAC
GATCGCGCCA AGAAGATCCT GGAGCAGAAC ATGGACAAGC TCCACGTGAT GGCCGAGGCC
CTGATGAAGT ACGAGACCAT CGACGTGGAG CAGATCAACG ACATCATGGA GGGCAAGACC
CCCCGTCCGC CCAGTGAATG GAGCGATGAC GAGCCCAAGG CGGGTGGCGG CACCCCCGCC
GAGGATGAGC ACGCCAAGGG CGGCGTGATC GGCGGGCCAG CCAGTCAGCA TTGA
 
Protein sequence
MNDLVKNLII WAVIAVVLMS VFNNFSPRTS TPQSLSYSQF ISEVKSGRIK SVYIENNTIE 
GRTINGERFT TYSPNDPGLI GDLLNNNVEI LAQEPQRRSL LMDILISWFP MLLLIGVWIY
FMRQMQGGAG GRGAMSFGKS KAKMMSEDQV KVTFADVAGC DEAKEEVAEL VEFLRDPSKF
QKLGGKIPRG VLMVGSPGTG KTLLAKAIAG EAKVPFFSIS GSDFVEMFVG VGASRVRDMF
DQGKKHAPCI IFIDEIDAVG RHRGAGLGGG HDEREQTLNQ LLVEMDGFEG TEGVIVIAAT
NRPDVLDPAL LRPGRFDRQV VVPLPDVRGR EQILKVHMRK VPLAENVRPD LIARGTPGFS
GADLANLVNE AALFAARGNK RLVDMHDFER AKDKIMMGAE RKSMVMNDAE KKLTAYHEAG
HAIVGRLVPE HDPVYKVSII PRGRALGVTM FLPEEDRYSH SKTRLESQIC SLFGGRIAEE
IIFGSDKVTT GASNDIERAT AIARNMVTKW GLSDRLGPLS YSEDEGEVFL GRQVTQHKHM
SDETAHAIDE EIRRVIDTSY DRAKKILEQN MDKLHVMAEA LMKYETIDVE QINDIMEGKT
PRPPSEWSDD EPKAGGGTPA EDEHAKGGVI GGPASQH