Gene Tgr7_0972 details

Gene Information

• Locus tag: Tgr7_0972
• Symbol: dnaK
• ID: 7315003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1049021
• End bp: 1050946
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643615857
• Product: molecular chaperone DnaK
• Protein accession: YP_002513047
• Protein GI: 220934148
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.760598
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAGA TCATCGGTAT CGACCTGGGC ACCACCAACT CCTGCGTGGC GGTGATGGAG 
GGCGACAAGG CCAAGGTCAT CGAGAACGCC GAAGGCGCCC GCACCACCCC CTCCATCGTC 
GCCTTCACCG AGGACGGCGA GGTGCTGGTG GGCCAGGCCG CCAAGCGTCA GGCGGTCACC 
AACCCCAAGA ACACCCTGTT CGCCGTCAAG CGCCTGATCG GTCGCCGCTT CGAGGAGCCG 
GAGGTCCAGA AGGACATCAA GCTGGTGCCC TACGAGATCT TCAAGGCCGA CAACGGCGAC 
GCCTGGGTGC GCGTGCGCGA CAAGAAGATG GCCCCGCCTG AGATCTCCGC CCGGGTGCTG 
CAGAAGATGA AGAAGACCGC CGAGGACTAT CTCGGCGAGC CGGTCACCGA GGCGGTGATC 
ACGGTGCCCG CCTACTTCAA CGACTCCCAG CGCCAGGCCA CCAAGGACGC CGGCAAGATC 
GCCGGTCTCG AGGTCAAGCG CATCATCAAC GAGCCCACCG CGGCGGCGCT GGCCTACGGC 
CTGGACAAGA AGCGCGGCGA CAGCAAGGTG GCCGTGTACG ACCTGGGCGG CGGCACCTTC 
GACGTGTCCA TCATCGAGAT CGCCGAGGTG GACGGCGAGC ACCAGTTCGA GGTGCTGGCC 
ACCAACGGTG ACACCTTCCT GGGCGGTGAA GACTTCGACA TGCGTCTCAT CGACTACCTG 
GTCGAGGAGT TCAAGAAGGA GCAGGGTATC GACCTCAAGG GCGACCCGCT CGCCATGCAG 
CGCCTGAAAG AGTCCGCCGA GAAGGCCAAG ATCGAGCTGT CCTCCAGCCA GCAGACCGAC 
GTGAACCTGC CCTACATCAC GGCGGACGCC AGCGGTCCGA AGCACATGAA CATCAAGGTG 
ACCCGCGCCA AGCTGGAGTC CCTGGTGGAA GAGCTGATCA AGCGCACCAT CGAGCCCTGC 
AAGGTGGCGC TCAAGGATGC CGGCCTGTCC GTGTCCGACA TCGACGACGT GATCCTGGTG 
GGTGGCCAGA CCCGCATGCC CAAGGTCCAG GACGCGGTGA AGAACTTCTT CGGCAAGGAG 
CCGCGCAAGG ACGTGAACCC GGACGAGGCC GTGGCCGTGG GCGCCGCGAT CCAGGCCGGT 
GTGCTGGGTG GCGAGGTCAA GGACGTGCTG CTGCTGGACG TCACCCCCCT GTCCCTGGGT 
ATCGAGACCC TGGGCGGCGT GATGACCAAG CTGATCGAGA AGAACACCAC CATCCCCACC 
AAGGCGACCC AGGTCTTCTC CACCGCCGAC GACAACCAGA CCGCGGTGAC CGTGCACGTG 
CTCCAGGGTG AGCGCGAGAT GGCCAGCGCC AACAAGTCCC TGGGCCGCTT CGACCTGACC 
GACATCCCGC CCGCCCCCCG CGGCGTGCCC CAGGTCGAGG TGATGTTCGA CATCGACGCC 
AACGGCATCC TGAACGTGTC CGCCAAGGAC AAGGCCACCG GCAAGCAGCA GTCCATCGTC 
ATCAAGGCCT CCTCCGGCCT GTCCGACGAG GAAGTGGAGC GCATGGTGCG CGACGCCGAG 
GCCCACGCCG ACGAGGACAA GCGCTTCCAC GAGCTGGTGG CCGCCCGCAA CCAGGCGGAC 
AACCTGGTGC ATGCCACCGA GAAGTCCCTG AAGGAACTGG GCGATCAGGT GGAGGCCGGC 
GAGAAGCAGG CCATCGAGTC CGCGCTCTCC GAACTGCGTG AGGCCATGAA GGGCGACAAC 
AAGGACGAGA TCGAGACCAG GACCCAGAAG CTGGCCGAGG CCTCCGGCAA GCTGGCCGAG 
CGGGTCTACG CCAAGCAGTC CGCCGAGGGC GGCGCCGGTG AGGGCGCCGG GGCCGAGCAG 
GCCTCCGCCC AGCAGGACGA CGTGGTGGAC GCCGAGTTCG AGGAAGTGGA CGACAAGAAG 
AAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVME GDKAKVIENA EGARTTPSIV AFTEDGEVLV GQAAKRQAVT 
NPKNTLFAVK RLIGRRFEEP EVQKDIKLVP YEIFKADNGD AWVRVRDKKM APPEISARVL 
QKMKKTAEDY LGEPVTEAVI TVPAYFNDSQ RQATKDAGKI AGLEVKRIIN EPTAAALAYG 
LDKKRGDSKV AVYDLGGGTF DVSIIEIAEV DGEHQFEVLA TNGDTFLGGE DFDMRLIDYL 
VEEFKKEQGI DLKGDPLAMQ RLKESAEKAK IELSSSQQTD VNLPYITADA SGPKHMNIKV 
TRAKLESLVE ELIKRTIEPC KVALKDAGLS VSDIDDVILV GGQTRMPKVQ DAVKNFFGKE 
PRKDVNPDEA VAVGAAIQAG VLGGEVKDVL LLDVTPLSLG IETLGGVMTK LIEKNTTIPT 
KATQVFSTAD DNQTAVTVHV LQGEREMASA NKSLGRFDLT DIPPAPRGVP QVEVMFDIDA 
NGILNVSAKD KATGKQQSIV IKASSGLSDE EVERMVRDAE AHADEDKRFH ELVAARNQAD 
NLVHATEKSL KELGDQVEAG EKQAIESALS ELREAMKGDN KDEIETRTQK LAEASGKLAE 
RVYAKQSAEG GAGEGAGAEQ ASAQQDDVVD AEFEEVDDKK K