| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0949 |
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| Symbol | |
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| ID | 7314980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1025254 |
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| End bp | 1026450 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615834 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002513024 |
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| Protein GI | 220934125 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.410592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGT CGCTCGCCAC CGCCAAGCCC GCCTCTCTCG CGCCCCGGCG CAGCTACAGC
GCTCAGGTGT TGCGCGAGGT GTTCCTGCGC TGGGGTGCCC GGGTGGGGCT CGCCTGGATC
CTGGTGCTGG TGGGCGTGTC GGTGTTCGCG CCCTTCATCG CCACCAGTCA TCCCCTGCTG
CTCTCCGAGG GCGGGCGGCT CTTCAGCCCC GCCCTGCGCC ACCTGACGCC GGCGGACGTC
ACCATCATGG CGGTGTTCCT GGCGGCGGTG GCGGTGCTGT TCTGGCGGGT GGCGTTCCGC
AAGCGCCTGG CAGTGGTCCT TGGCGTGCTG GCGCTGAGCG CGACGCTCAG CTACAGCCTG
ATCACGCCGC CCTCCCTGGT GATCTTCGAG CAGTACCGGG AGGCGGAGGC CGCCGGGCAG
TATGACTGGG TGTGGCGTGC GCCGATTCCC TATTCCCCCA AGGACTACCT GCGTGATTTC
GGCGACACCG GCCTCGAGGC CCCGCTCGAG AGTGCCGAGC GGCGCCACTG GCTGGGCACG
GAGGAGAACG GCGCAGACGT GCTCTCACGC ATGATCCACG CCTCGCGCAT CGCCCTGGCC
ATCGGCTTCA TCGCCACGGG CATCGCGCTC GGCATCGGCG TGATCATCGG CGGCCTGATG
GGCTACTTCT CCGGCATCGT GGACATCATC GGCATGCGCC TGGTGGAGAT CTTCGAGGCC
ATCCCCACGC TGTTCCTGCT GCTCACCTTC GTGGCCTTCT TCGGTCGCAG CCTGTACATG
ATGATGATCA TCATCGGCAT CACCTCCTGG TCGGGCTATG CCCGCTACGT GCGCGCCGAA
TTCCTCAAGC TGCGCCAGCA GGAATACGTA CAGGCGGCGG TGGCCTGCGG CCTGCCGCTG
CGCTCCATCC TGTTCCGCCA CATGCTGCCC AACGGCGCCG CGCCCATCCT GGTGGCGGCA
AGCTTCGGTG TGGCCTCCGC CATCCTCGCC GAGGCGACGC TGAGCTTCCT GGGCCTGGGC
CTGGTGGACG ATCCCTCCTG GGGCCAGATG CTCAACCAGG CAGTGCAGTC CTCCACCTTC
AACTGGTGGA TGGCGGCCTT CCCGGGCGGC GCCATCTTCC TCACGGTGTT CGCCTACAAC
CTGGTGGGCG AATCCCTGCG CGACGCGCTG GATCCGCATT TGAAGAAGAG CATCTAA
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| Protein sequence | MTESLATAKP ASLAPRRSYS AQVLREVFLR WGARVGLAWI LVLVGVSVFA PFIATSHPLL
LSEGGRLFSP ALRHLTPADV TIMAVFLAAV AVLFWRVAFR KRLAVVLGVL ALSATLSYSL
ITPPSLVIFE QYREAEAAGQ YDWVWRAPIP YSPKDYLRDF GDTGLEAPLE SAERRHWLGT
EENGADVLSR MIHASRIALA IGFIATGIAL GIGVIIGGLM GYFSGIVDII GMRLVEIFEA
IPTLFLLLTF VAFFGRSLYM MMIIIGITSW SGYARYVRAE FLKLRQQEYV QAAVACGLPL
RSILFRHMLP NGAAPILVAA SFGVASAILA EATLSFLGLG LVDDPSWGQM LNQAVQSSTF
NWWMAAFPGG AIFLTVFAYN LVGESLRDAL DPHLKKSI
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