| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0947 |
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| Symbol | |
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| ID | 7314978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1021885 |
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| End bp | 1023753 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615832 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002513022 |
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| Protein GI | 220934123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACAC GTTTTGCCGC CAAAGACCTG ACCCTGATCC TTGGCCTGGT CATCCTGGGC
GTGATGCTGA TCCTGCTCAT GTACCAGGTG GACCGCCAGT GGAGCCGCAT GAGCGAGATG
CAGCGGGCCA TGCAGGAGCA GTCCGACGAT CTGCGTCGGC TGCGCGTGGC CCTGCAGTCC
CTGGAGACCC GGGTGCGCAG CGGCGTGGCC GTGGGTGCAG GGGAGGGGGA TCAGCTGGCC
GATGTCCCGC CCGCCTTCCG GCGCGCGCAA CAGGCCGCCG CCCAGCCCGA CTTCGCCCCC
GGCGACTGGC TGGTGCAGGC CTTCCCCACG GGGCTGAGCA CCATCACCCC TCTGGTGTCC
GCCGACGCCT ATTCCCGGGA GGTGCAGAAC TACGTGCTGG AGTCCCTGAT CACCCGGGAT
CCGGACACCC TGGAATGGCA GGGCCTGATC GCCCGGGACT GGACCATCAG CGAGGACGGA
CTCACCATCA CCTTCCGCAT GCGCCCCGAC GTGAACTTCT CCGACGGCGT GCCGCTCACC
GCCCACGACG TGGTGTTCAC CTGGGCCTTC ATCATGAACG AGGCCATCGC CGCGCCCCGT
TCCCGGGCCT ACCTGGAGAA GCTGGAGAAG GTGGAGGCCC TGGATGATCA CACCGTGGCC
TTCACCTTTG CCGAGCCCTA CTTCAACAGC CTGTCCCTGG CCGGCGGCCT GGAGATCATG
CCGAGGCATT TCTACGCGCG TTTTCTGGAC GATCCCGAGG CCTTCAACCG TTCCCGCGGC
CTGCTGCTGG GTTCCGGCCC CTACCGGCTG TCCGACCCCG AGGGCTGGAC TCCGGACCAG
GGCCTGGTGG AGCTGGTGCG CAATCCGCGC TACTGGGGGC CGGTGGATCC GCCCTTCAAC
CGGGTGCTCT GGCGTGTCAT CGAGAACGAC AGCGCCCGCC TGACCACCTT CCGCAACGGC
GAGATCGACG CCTACGGCGC ACGTCCCCGT GAGTACCAGC GCCTGCTGGA GGACGAACAG
TTGCGCAGCC GCACCCGGCA CTTCGAGTAC ATGAGCCCCA CCGCCGGCTA CAACTACATC
GGCTGGAACC AGGAGCGGGA CGGGCGTGCA ACCCGCTTCG CCGATCCTCG GGTGCGCCAG
GCCATGAGCC ACCTCACGCC GATCGAGCGC ATCATCGACG AGATCATGCT GGGCTATGCG
GAGCCGGCGG TCAGCCCCTT CAACCCCCGC AGCCCGCAGC ACGACACGAG CCTCGAACCC
TATGCCTTCG ACATCGAGCG GGCCACGCAG CTGCTGCACG AGGCGGGCTA CCGCAGCCGC
AACCGTGACG GCATCCTGGT GGACGAACAG GGCAGGCCAT TCGAGTTCGA GCTGGTGTTC
TTCCAGGACA ACGAGGACAC CCGGCGCATC GTGCTGTTCC TGCGCGACAT CTACGCCCGG
GCCGGTATCC TGCTGCGTCC GCGGCCCACG GAGTGGTCGG TGATGCTGGA CCTGCTCACC
CGCAAGGACT TCGACGCCAT CACCCTGGGC TGGACCAGCG GCGTGGAGAC CGACATCTAC
CAGATGTTCC ACTCCAGCCA GACCGTGGCC GGCGGCGACA ACTTCATCAA CTACCGCAAC
CCGGAACTGG ACCGGCTCAT CGACCAGGCC CGGGCCGAGG TGGACGAGGC CGCGCGCATG
GCACTCTGGC AGCAGGTCGA GCGCATCCTG TACGAGGATC AGCCCTACAC CTTCCTCATG
CGCCGCCAGA CGCTCGCCTT CATCGACCAG CGCCTGCACA ACCTGCAGAT CACCAATCTG
GGCCTGAATC TCGGTGCGGT GCCCGTGGAG ACCTATGTGC CAGCGGATAT GCAGAGGTAC
ACGAGATGA
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| Protein sequence | METRFAAKDL TLILGLVILG VMLILLMYQV DRQWSRMSEM QRAMQEQSDD LRRLRVALQS
LETRVRSGVA VGAGEGDQLA DVPPAFRRAQ QAAAQPDFAP GDWLVQAFPT GLSTITPLVS
ADAYSREVQN YVLESLITRD PDTLEWQGLI ARDWTISEDG LTITFRMRPD VNFSDGVPLT
AHDVVFTWAF IMNEAIAAPR SRAYLEKLEK VEALDDHTVA FTFAEPYFNS LSLAGGLEIM
PRHFYARFLD DPEAFNRSRG LLLGSGPYRL SDPEGWTPDQ GLVELVRNPR YWGPVDPPFN
RVLWRVIEND SARLTTFRNG EIDAYGARPR EYQRLLEDEQ LRSRTRHFEY MSPTAGYNYI
GWNQERDGRA TRFADPRVRQ AMSHLTPIER IIDEIMLGYA EPAVSPFNPR SPQHDTSLEP
YAFDIERATQ LLHEAGYRSR NRDGILVDEQ GRPFEFELVF FQDNEDTRRI VLFLRDIYAR
AGILLRPRPT EWSVMLDLLT RKDFDAITLG WTSGVETDIY QMFHSSQTVA GGDNFINYRN
PELDRLIDQA RAEVDEAARM ALWQQVERIL YEDQPYTFLM RRQTLAFIDQ RLHNLQITNL
GLNLGAVPVE TYVPADMQRY TR
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