Gene Tgr7_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0917 
Symbol 
ID7315942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp988894 
End bp989559 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content58% 
IMG OID643615795 
Productprotein of unknown function DUF1568 
Protein accessionYP_002512992 
Protein GI220934093 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGA TCGGTCGTGT AGTCATTCCC GGGTATCCGC ATCATGTGAC CCAACGGGGT 
AACCGCCGCC AGCGGGTCTT TTTTTCCGAG ATGGATTTTC ACTATTACAT CGAACTCATG 
GCGGAGTTCA CCGAAGCAAC CCAAACAGAG ATTTGGGCCT ACTGTCTGAT GCCTAACCAC 
GTTCATCTCG TGATGGTTCC ACAGCATGAG GATGGCTTGC GCGCTGCTCT TGGCGAGGTG 
CATCGCCGTT ACACGCGCCG CATCAACTTT CGCAATGGAT GGCGGGGACA TCTTTGGCAG 
GAGCGCTTTC ACTCATTTGT CATGGATGAG CAGTACCTGC TTGCGACGGT TCGCTATGTC 
GAGCTCAACC CGGTGAAGGC CGGGCTTTGT CGACAGCCTG CCGACTGGCG CTGGTCGAGT 
GCGTTGGCCC ACATGGAAGG TCAGGATGAC CGCCTGGTCA AGGTGCAGCC GATGATCGAC 
AGGGTCGGCG ACTGGTCGGC CTATCTTTCC CATGACCCGG TTGAAGAGCA TGAGCACATC 
GCTCGACACA CCCGCACCGG AAGGCCACTC GGTAGCGCGG CCTTCGTAGA ACAACTCGAA 
GCGCTTACCG GAAAGTCATT GGCGCCGAAA CGCCCCGGAC GTAAGGCTCG TCGGGAAACG 
AAATAG
 
Protein sequence
MARIGRVVIP GYPHHVTQRG NRRQRVFFSE MDFHYYIELM AEFTEATQTE IWAYCLMPNH 
VHLVMVPQHE DGLRAALGEV HRRYTRRINF RNGWRGHLWQ ERFHSFVMDE QYLLATVRYV 
ELNPVKAGLC RQPADWRWSS ALAHMEGQDD RLVKVQPMID RVGDWSAYLS HDPVEEHEHI 
ARHTRTGRPL GSAAFVEQLE ALTGKSLAPK RPGRKARRET K