Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0899 |
Symbol | |
ID | 7315923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 970155 |
End bp | 971336 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643615779 |
Product | HflK protein |
Protein accession | YP_002512977 |
Protein GI | 220934078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0975444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTGGA ACGAACCAGG AAAGAACAGC AACGACCCCT GGAGCGGCGG TGGCCGCAGC GGTGGCGGCG GTGGCGGCGG CGGCCAGAGC GGCCCGCCGG ACCTGGACGA GGTGCTGCGC AAGCTGACCC GCCAGCTGAA CGGCATCTTC GGCGGTGGCG GCGGCAGCGG TGGCGGTGAT GGCGGCGGCA TGGGGCGTCA CGCCTCCGCC GGCATCAGCT TGATCCTGAT CGTCGCCCTG GTGGTCTGGC TGGCCTCCGG CTTCTACATC ATCAGCGAAG GTGAGCGCGG CGTGGTGCTG CGTTTCGGTT CCTTCCAGTC GGTGTCCCAG CCGGGTCCCA ACTGGCATCT GCCCTATCCC ATCGAGTCGG TGGAGCGGGT GGACATTGAC AGCATCCGAA GCATCCAGCA CCGGGCCCTG ATGCTCACCG CGGACGAGAA CATCATCGAC GTGGACGTGG CCGTGCAGTA CCGCGTCATG GACCCGGTGG ACTTCCTGTT CAACGTGCGT GATCCGGACC GCACCACCCG CCAGGTGATG GAATCGGCCA TCCGCGAGCG GGTGGGCAAG AACAACCTGG AATTCATCCT GGGTGAGGGT CGTGGCGAGA TCGCCACCAG CGCCCGGACG GTGATCCAGG AGGCCCTGGA TGCCTACGGC GCGGGCGTGA CCGTGACCAC CGTGAGCATG CAGCAGGCCC AGCCGCCGGA ACCGGTGCAG GAGTCCTTCG CTGACGCCAT TCGTGCCCGT GAGGACGAGG CCCGCTTCCG TAACGAGGCC GAGGCCTATG CCAATGCCAT CGTGCCCCAG GCGCGAGGCG AGGCGGCCCG TATCCGCGAG GAGGCCCAGG CCTATCGCGA GCAGGTCATC GCCCGGGCCG AGGGTGATGC CTCCCGCTTC AGCCAGCTGC TGGTGGAATA TCAGCGCGCC CCCGACGTGA CCCGTCAGCG TCTCTACCTG GAGACCGCCG AGGCCGTGCT GGGTGGCACC AACAAGGTGA TCGTCGACAT GCAAGGCGGC AACAACCTGA TGTACCTGCC CCTGGACAAG TTCATGCAGT CCCAGGGCGC CACGACCACG CCGCCCCGCG TGATCGATCA GCGTGGCGTG GACAGCTCGC GGCCCGCGCC GCTGCCGAAC CTCGGCACGC GTCCTGATCC CCGTGCCCGG GAGGTGCGCT GA
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Protein sequence | MPWNEPGKNS NDPWSGGGRS GGGGGGGGQS GPPDLDEVLR KLTRQLNGIF GGGGGSGGGD GGGMGRHASA GISLILIVAL VVWLASGFYI ISEGERGVVL RFGSFQSVSQ PGPNWHLPYP IESVERVDID SIRSIQHRAL MLTADENIID VDVAVQYRVM DPVDFLFNVR DPDRTTRQVM ESAIRERVGK NNLEFILGEG RGEIATSART VIQEALDAYG AGVTVTTVSM QQAQPPEPVQ ESFADAIRAR EDEARFRNEA EAYANAIVPQ ARGEAARIRE EAQAYREQVI ARAEGDASRF SQLLVEYQRA PDVTRQRLYL ETAEAVLGGT NKVIVDMQGG NNLMYLPLDK FMQSQGATTT PPRVIDQRGV DSSRPAPLPN LGTRPDPRAR EVR
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