Gene Tgr7_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0894 
Symbol 
ID7315918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp963804 
End bp965222 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content71% 
IMG OID643615774 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_002512972 
Protein GI220934073 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGG AGCCTGAAAT CCACCGGGAG TCCGTCGTGA GCCAGTCCAA CCAGGGATAT 
CCGAGACGCC GTTTTCTGCT GGAGCTGCTG CGCGCCTCCG GCATGACGGC CGCGTCCGTG
ATGGCCCCGG GCGTGCTGCT GGCCGCCGGC CGTCATCACC AGGTGCAGGG CATCCGCCTG
TCCGCCCACG AGGGCCAGAC ACGGCTGGTG TTCGACCTCA CCGGTCCCGT GGAACACAGC
CTGTTCACCC TCACCGACCC GCACCGGGTG GTGATCGACA TCCAGGGCGC CAGCGCCCGG
GATCTGGTCG TGCCCTCCGT GCCCGACTCC GTGGTCTCCC GCCTGCGCTA CGCGCCGCGC
AACAACACCG ACCTGCGGGT GGTGCTGGAC CTGCGTGCCC AGGCCAACCC GCGCAGTTTC
GTCCTGCGTC CCGGCGAGGG CGCCGGTCAT CGCCTGGTGG TGGACCTGCA GCGCCAGGGC
AGTGCCCTGG TCTCCGCGCC CGCCCCGCAG CCCCAGCAGC CGATCCGTTC CATGGACCAG
CCCGCGCCCC GTCTGCGCGA GGTGGTAGTG GCCATCGACG CCGGCCACGG TGGCCGGGAT
CCCGGCGCCG TGGGCCAGGG CGGCACCCGG GAGAAGGACG TGGTGCTGGC CATCGCCCAG
CGCCTGGAGC GCCTGGTGGC CCGGGAGCCG GGCATGAAGC CGGTGATGAT CCGCACCGGC
GATTACTTCC TGCCCCTGCG TGATCGCATC CGTCGCGCCC GGGATCAGCG CGCCGACGTG
TTCATCTCCA TCCATGCCGA TGCCGCCCCG GACCGCCGGG TGCAGGGTTC CTCCGTGTAC
ATCCTCTCCC AGGGCGGCGC CACCAGCGAG GCCGCCCGCT GGCTGGCCGA GCGCGAGAAC
GCCGCCGACC TGGTGGGCGG CGTGAAGCTG GACGACAAGG ACGACGTGCT CGCCTCGGTG
CTCCTGGACC TGTCCCAGAC CGGCACCATC GAGGCCAGCG CCACCCTCGC CGACTCCCTG
ATCGGAGACC TGCACCGGGT GGGCAAGGTG CGCAGCCGCC GCGTGGAGCG GGCCGGTTTC
GCCGTGCTCA AGTCCCCGGA CATCCCCTCG GTGCTGGTGG AGGCCGCCTT CATCTCCAAC
CCCGCCGAGG AGCGCAAGCT GCGCACCCCG GCCTTCCAGC AGTCCCTGGC CGAGGCCCTG
ATGGGCGGCC TGCGCTCCTA TTTCAGCAAC CACGCCCCGC CGGGCACCAT CCTGGCCGAG
ACCCGCCGTG GCCGCCACGT GATCCAGAGC GGCGAGACCC TGTCCACCAT CGCCAGCCGC
TACCAGGTCT CCCTGAACGA GCTGCGCCAG CACAACAACC TGTCCAACGA CCGCATCAGC
GCGGGGCAGG TGCTGGTGAT TCCGAGAAGG GACAGTTGA
 
Protein sequence
MAREPEIHRE SVVSQSNQGY PRRRFLLELL RASGMTAASV MAPGVLLAAG RHHQVQGIRL 
SAHEGQTRLV FDLTGPVEHS LFTLTDPHRV VIDIQGASAR DLVVPSVPDS VVSRLRYAPR
NNTDLRVVLD LRAQANPRSF VLRPGEGAGH RLVVDLQRQG SALVSAPAPQ PQQPIRSMDQ
PAPRLREVVV AIDAGHGGRD PGAVGQGGTR EKDVVLAIAQ RLERLVAREP GMKPVMIRTG
DYFLPLRDRI RRARDQRADV FISIHADAAP DRRVQGSSVY ILSQGGATSE AARWLAEREN
AADLVGGVKL DDKDDVLASV LLDLSQTGTI EASATLADSL IGDLHRVGKV RSRRVERAGF
AVLKSPDIPS VLVEAAFISN PAEERKLRTP AFQQSLAEAL MGGLRSYFSN HAPPGTILAE
TRRGRHVIQS GETLSTIASR YQVSLNELRQ HNNLSNDRIS AGQVLVIPRR DS