Gene Tgr7_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0892 
Symbol 
ID7315916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp961587 
End bp963059 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content74% 
IMG OID643615772 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_002512970 
Protein GI220934071 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.177662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCA CCCTGCCCGC AGCACTCTAC ACCGCCACCC AGGTTCGGGA ACTGGACCGG 
CGCGCCATCG AGAATCACGG CGTGCCCGGC TACAGCCTCA TGACCTGCGC CGGACAGGCC
GCCTTTGACC GGCTGCGTGA GCGCTGGCCC GAAGCCCGGC GCATCGGTGT GCTGTGCGGA
CCGGGCAACA ATGGCGGCGA TGGCTACGTC ATCGCCCGCC TGGCCCGGGC CGCGGGGCTC
GGCTGCTGGG TGCTGGAGGC GGGCGATCCG GCGCGCCTGA AGGGCGATGC CGCCCGGGCC
CGGGCCGACT GGGTGCAGGC GGGCGGGACG CCATTCTCCG GTGCTGCGCC CTGGCCCGAG
GCGGATGTGC TGGTGGATGC CCTGCTGGGC ACCGGGCTCG ACCGGGCGGT GGAGGGCGCC
CTGGGCGGGC TGATCGATGC TATCAACGCC TCCGGACTGC CGGTGCTCGC AGTGGACATC
CCCTCGGGGC TGCATGCCGA TACCGGGGCG GTGCTCGGCC GGGCGGTGCG CGCGGCCGTG
ACCGTGAGCT TAATCGGCCT CAAGACCGGC CTGTTCACCG GCGAGGGGCC GGCCTGCTGC
GGGGAAGTGG TGTTCGACCC GCTGGATGTG CCCGAGGCGG TCTACCGGGA CTTGCCCCCC
GCGGCCACCC GCCTGGATGC CGCCTGTATC CAGCGGCTCG GGCTCCGTGC CCGCAGTGCC
CACAAGGGAC ACTTCGGCCA TGTGCTGGTG GTGGGCGGTG ACCGGGGCAT GCCCGGGGCC
GTGCGCCTGG CCGGGGAGGC AGCGGCGCGC AGCGGCGCGG GGCTGGTGTC GGTGGCCACC
CATCCGGATC ACGCCCCCCT GCTGCCCCTG GCGCGACCGG AGCTGATGGT CCACGGGGTC
GCCACGCCCG CCGATCTCTC GCCCCTGCTG GCCCGGGCCA CGGTGCTCGC GGTGGGGCCG
GGCCTGGGGC AGGGGGACTG GGGCCGGGCG CTGCTGGGCC GACTGCTGGA GACGGGTCTG
CCCCTGGTGC TGGATGCCGA TGCCCTGAAC CTGCTGGCCC AGGAAGGCGC GCGCCGTGAC
GACTGGGTCC TCACCCCCCA CCCCGGCGAG GCGGCCCGCC TGCTGGGCCG CGACACCGCC
TCGGTGCAGG CGGATCGCCT TGCCGCCGCC CGGGAGATCC AGGCCCGCTA TGGCGGCGTG
TGCGTGCTCA AGGGGGCGGG CACGGTGATC CGGGACGCCG AAGGCACCGC CATCTGTACC
GGCGGCAACC CGGGCATGGC CAGCGGCGGC ATGGGCGATG TGCTCACCGG CATCATCGCC
GGCCTGCTGG CCCAGGGCCT GTCCACGGTC CTGGCCGCCC GCCTCGGTGT CTGTGCCCAC
GCCGAGGCCG CCGACCGGGC CGCCCGGGCG GGTGAACGGG GGCTGCTGGC CTCGGATCTG
CTTACCGAAC TGCGCGGAGT CGTCAATCCA TGA
 
Protein sequence
MNRTLPAALY TATQVRELDR RAIENHGVPG YSLMTCAGQA AFDRLRERWP EARRIGVLCG 
PGNNGGDGYV IARLARAAGL GCWVLEAGDP ARLKGDAARA RADWVQAGGT PFSGAAPWPE
ADVLVDALLG TGLDRAVEGA LGGLIDAINA SGLPVLAVDI PSGLHADTGA VLGRAVRAAV
TVSLIGLKTG LFTGEGPACC GEVVFDPLDV PEAVYRDLPP AATRLDAACI QRLGLRARSA
HKGHFGHVLV VGGDRGMPGA VRLAGEAAAR SGAGLVSVAT HPDHAPLLPL ARPELMVHGV
ATPADLSPLL ARATVLAVGP GLGQGDWGRA LLGRLLETGL PLVLDADALN LLAQEGARRD
DWVLTPHPGE AARLLGRDTA SVQADRLAAA REIQARYGGV CVLKGAGTVI RDAEGTAICT
GGNPGMASGG MGDVLTGIIA GLLAQGLSTV LAARLGVCAH AEAADRAARA GERGLLASDL
LTELRGVVNP