Gene Tgr7_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0880 
Symbol 
ID7315903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp949053 
End bp949703 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID643615759 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002512958 
Protein GI220934059 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1428] Deoxynucleoside kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGA AGACGCCCTC CTACATCGTG GTGGAAGGCC CCATCGGCGT GGGCAAGACC 
AGCCTCGCCC GGCGCCTGGC CGAGACCCTC AACGCGGAGC TGCTGCTGGA GGCCCCGGAG 
GAGAACCCCT TCCTGGAGCG CTTCTACCAG GATCCCAGGG GCGCGGCCCT GCCCACCCAG 
CTGTTCTTCC TCATGCAGCG GGTACGCCAG ATGGCGGAAC TGCGCCAGGG GGACATCTTC 
AAGCCGGTGC GGGTGTCGGA TTTTCTCATC GAGAAGGACC GCCTGTTCGC CCAGGTGACC 
CTGGACGACG ACGAGCACAG CCTCTACGAG CAGGTCTACA GCCAGATGAC CCTGGACGCC 
CCCAAGCCGG ACCTGGTGAT CTACCTCCAG GCCCCGGTGG AGGTGCTCCT GGAGCGCATC 
GCCCGGCGCG GGCGGGGCTA CGAGCGGCTC ATGGACAGCG CCTACCTGCA CCGCCTGAGC 
GAGGCCTACG CCAGTTTCTT CTATCATTAC GAGGACGCGC CGCTGTTGAT CGTCAATGCC 
AGCGGCATCG ACTGGGTCAA CCGCGACGAG GACTTCCAGC AGCTGCTGGA CTTCATGCGC 
GGCGTGAGCG CCGGTCGCCA CTACTTCAAT CCCCTGCCCT TCGCGATGTG A
 
Protein sequence
MSEKTPSYIV VEGPIGVGKT SLARRLAETL NAELLLEAPE ENPFLERFYQ DPRGAALPTQ 
LFFLMQRVRQ MAELRQGDIF KPVRVSDFLI EKDRLFAQVT LDDDEHSLYE QVYSQMTLDA 
PKPDLVIYLQ APVEVLLERI ARRGRGYERL MDSAYLHRLS EAYASFFYHY EDAPLLIVNA 
SGIDWVNRDE DFQQLLDFMR GVSAGRHYFN PLPFAM