| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0867 |
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| Symbol | |
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| ID | 7315890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 932991 |
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| End bp | 934835 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643615746 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002512945 |
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| Protein GI | 220934046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.18544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACGG ATCAATGGTT GCTGGCCGGG GTGCTGCTCG CCACCCTGGT GTTGTTCCTC
TGGGGACGCT GGCGCCATGA CGTGGTTGCG GTGGCGGCCC TGCTGGCGAG CGTCGCCCTA
GGCCTGGTGC CTTCCGCCGA GGCCTTCTCC GGCTTTGCCC ACCCCGCGGT GATCACCGTG
GCCTGCGTGC TGGTCCTGAG CCACGGGCTG CAGACCTCCG GCGCCGTAGA CGCGCTGGTG
CGCCGGGTCA TGCCCGGCGC CGCCGGTCCG ACACTCACCA TTGCCGTGCT CACGGGGCTC
GGCGCCCTGC TGTCCGGTTT CATGAACAAC GTGGGCGCGC TCGCCCTGCT CATCCCGGTG
GCCCTGCAAG TGGCCGCGCG CATGGAGGTG GCGCCTGCAC GGGTGCTCAT GCCGCTGGCC
TTCGGCACCA TCCTGGGCGG CATGATCACC CTGGTGGGTA CGCCGCCCAA CCTGATCGTC
TCGGGATTTC GCGCCGAGGC GGGCCTGGGC CCCTTCGGCA TGTTCGATTT CACCCCGGTG
GGCCTGGCGG TGGCGGCCCT GGGCGTGCTG TTCGTGGCCC TGGTGGGCTG GCGCCTGGTG
CCGGCCCGCA AGCCGGGTGC GGAAGGTTTC GAGACCGAGG CCTATCTCAC CGAGGTGCGC
GTGCACGAGG ACAGCGAGCT GGCCGGACGC TGCCTGCGGG ATGTGGACGA GAAACTCAGG
GACCAGGATG CCCATGTGGT GAGCCTCGTG CGTCACGAGG TGCGCATGGT GGCGCCCCAT
CCGGGCCGCA GGATCCATGC TGGCGACATC CTGGTGATCC AGGCCGAGGC CGAGGCCCTG
GCGGGGGTGC TGGGCAGTCT GGGGCTCAAG CTGGAAGAGG CCGTCGCGCC GGAGGAGGAC
GAAGGGGAGG CGGTCGAGAT CGCCAGCACC TCGAAGCACG AGGTCAAGGC CAGTAAGGAC
CAGGAGGTCG AGGAGGAAGC ACCCAGGGAG GACGAGATCG GCCTGGTGGA ACTGGCCGTC
CTGCCCCAGT CCTCGGTGAT CGGACGGACC CCCAGTGACA TCCAGTTGCG CACCCGCTAT
GGCATCAACC TGCTGGCCAT CTCCCGTCAG GGCCGGCGTT CCGCCACTCG CCTGCGGGCA
ACGCCCCTGC GCGCGGGGGA CGTGCTGCTC ATGCAGGGTT CGCCGGAAGC GATCTCGGAA
TTCGCCGCCA ACGCGGGTTG CGTGCCCCTG GCGGAGCGCG CGCTGACCAT CCCGGATCGT
CGCAAGGCGA TCCTCGCCAC GGGCATCATG GGCATGGCGG TGGCGGCGGC CACCCTGGGC
GTGCCCGCCG CCCTGGCCTT TGCCGCCGGG GTGCTGCTGT CCCTGCTGGT GCGTACCGTC
GCCCTGCGTC AGGTCTATCA GTCGGTGGAC TGGCCGGTGG TGGTGCTGCT GGCGGCGCTG
ATCCCCGTGG CCGGCGCCAT GCAGGCCACC GGGCTTGCCG GCCTGGTCGC CCAGTTCATG
GTGGACACCC TGGCCCAGGG CCACGTGATC GTCGCGCTGC TGCTGATCCT GGTGGTGACC
ATGATGCTCT CGGACCTGAT GAACAACGCC GCCACGGCGG CAGTCATGTG TCCCATCGCC
ATCGGCATCG CCGGCCAGCT GGGGGTGAAC GTGGATACCT TCCTGATGGC CGTGGCGGTG
GGTGCCTCCT GCGCCTTCCT CACCCCTATC GGCCATCAGA ACAACACCCT CATCCTGGGA
CCGGGCGGCC TGCGTTTCGG GGATTACTGG CGGTTGGGCC TGCCGCTGGA GGTACTGGTG
GTGGCGGTGG CGGTGCCCAT GCTTCTGATC GTCTGGCCGC TGTGA
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| Protein sequence | MSTDQWLLAG VLLATLVLFL WGRWRHDVVA VAALLASVAL GLVPSAEAFS GFAHPAVITV
ACVLVLSHGL QTSGAVDALV RRVMPGAAGP TLTIAVLTGL GALLSGFMNN VGALALLIPV
ALQVAARMEV APARVLMPLA FGTILGGMIT LVGTPPNLIV SGFRAEAGLG PFGMFDFTPV
GLAVAALGVL FVALVGWRLV PARKPGAEGF ETEAYLTEVR VHEDSELAGR CLRDVDEKLR
DQDAHVVSLV RHEVRMVAPH PGRRIHAGDI LVIQAEAEAL AGVLGSLGLK LEEAVAPEED
EGEAVEIAST SKHEVKASKD QEVEEEAPRE DEIGLVELAV LPQSSVIGRT PSDIQLRTRY
GINLLAISRQ GRRSATRLRA TPLRAGDVLL MQGSPEAISE FAANAGCVPL AERALTIPDR
RKAILATGIM GMAVAAATLG VPAALAFAAG VLLSLLVRTV ALRQVYQSVD WPVVVLLAAL
IPVAGAMQAT GLAGLVAQFM VDTLAQGHVI VALLLILVVT MMLSDLMNNA ATAAVMCPIA
IGIAGQLGVN VDTFLMAVAV GASCAFLTPI GHQNNTLILG PGGLRFGDYW RLGLPLEVLV
VAVAVPMLLI VWPL
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