Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0866 |
Symbol | |
ID | 7315889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 932104 |
End bp | 932946 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615745 |
Product | UspA domain protein |
Protein accession | YP_002512944 |
Protein GI | 220934045 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.111703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT CCCAATCCCC CCTGGGGCAG TTGCAGGACG TCCTGCTGGC CACCGACGCC TCCGAAAACA GCCAGGCCGC GGAGGCCGCT GCCCTGGAGC TGGCGTCGCG TGTGGGTGCG CGTCTGCATA TCCTGCGCGT GGTGGTCACC ACGCCCGAGC AGGCCGCTGA GATGCCCCGC TGGGTGGCGG AGGCGGGTGA CGAGGCCAAG GCCTATATCG ACGGCCTGAA GGAGCGTGCC GTGGCACAGG GCCTGAGCGC CGACACCTAC GTGCGCACCA GCAGCGACCC CTATGGCGAG ATCGCCGCCA CGGCCCAGAA GCTCGGCTGC GGCCTGATCA TGCTCGGCCG TCACGAGCGC AGCGAGTTCG CCCGCCTGCT CAAGGGCCAG ACCATCAACC GTCTCATGGA AAAGGCCCGG TGCAGCGTCA TGATGCTGCC CGCGGGCACC ACCCTGCCGA CTGCGCGCAT CCTCGTGGCC ACCGACGGGT CCGAGTTCGG CGATGCGGCG GTGGCTGGCG CCGTCGATCT GGCCAGCCGT CTGCAACTGC CGCTCACCGC CGTGTCGGTC TATGCGCCGG GCTCCGCCGA CGATGTCCAT GCCCAGGCCT ACGACGCCGT GGCCCGTGCC CAGGAGGCTG CGGGCAGTAT CCCCTTCGAC GGACGCACGC TGGAAGGCAA GCCCGCCGAG GCCATTCTGG AGGTGGCCGC GGAGACCGGT GCCGACCTGA TCGTCCTCGG CAGCCTGGGC CGCAGTGGTC TGGGCCGGTT GTTCATGGGC TCCGTGGCCC AGAAGGTGGT CTCGGGCTCG CCCTGCGCCG TGTTGGTGAC CATCCGTACC TGA
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Protein sequence | MTDSQSPLGQ LQDVLLATDA SENSQAAEAA ALELASRVGA RLHILRVVVT TPEQAAEMPR WVAEAGDEAK AYIDGLKERA VAQGLSADTY VRTSSDPYGE IAATAQKLGC GLIMLGRHER SEFARLLKGQ TINRLMEKAR CSVMMLPAGT TLPTARILVA TDGSEFGDAA VAGAVDLASR LQLPLTAVSV YAPGSADDVH AQAYDAVARA QEAAGSIPFD GRTLEGKPAE AILEVAAETG ADLIVLGSLG RSGLGRLFMG SVAQKVVSGS PCAVLVTIRT
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