Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0841 |
Symbol | |
ID | 7315864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 904899 |
End bp | 906272 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615720 |
Product | DNA repair protein RadA |
Protein accession | YP_002512919 |
Protein GI | 220934020 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAGGG CAAAGACCCA GTATCACTGC ACCGCCTGCG GCGCCGTGCA CCCCAAGTGG GGCGGACAGT GCGCCGACTG CGGTGCCTGG AACACCCTGG AGGAGACCAT CGCCTCGGCG CCCGCAGCGG CCGCGAGCCC GCGCTTCGCC GGCTATGCCG GCGAGGCCGC CACCATCCGC CGACTGGGCG ACGTGGTGGT GGAGGCGGAA CCGCGCAGCG GCACCGGACT CTCGGAACTG GACCGGGTGC TGGGCGGCGG CCTGGTACAC GGCTCCGTGG TGCTCATCGG CGGCGATCCC GGCATCGGCA AGTCCACCCT GCTGCTGCAG ACCCTTGCCA TCATGACCGG CGCGGACGGC GGTGCCATGA ACGGTCTGTA CGTCACCGGC GAGGAATCCC CCCAGCAGGT GAGCCTGCGC GCCCGGCGCC TGGGCCTGCC CTACGAGGAC CTGAAGCTCC TCACCGAGAC CTGCGCCGAG CGCATTATCC AGCACGCCCA GCAGGCCCGC CCCGACATCA TGGTGGTGGA CTCCATCCAG ACCCTCTATA CGGAACAGCT GCAGTCCGCC CCGGGATCGG TGGCCCAGGT GCGGGAATCC TCCGCCCAGC TGGTGCGCTT CGCCAAGCAG ACCGGCACGG CCCTGTTCAT CGTCGGCCAC GTCACCAAGG AAGGTCAGCT GGCCGGCCCC AGGGTGCTGG AGCACATGGT GGACACGGTG CTGTATTTCG AGGGCGATCC CGGCGGGCGC TACCGGGTCC TGCGCGCGGT GAAAAACCGC TTCGGCGCGG TCAACGAACT GGGCGTGTTC GCCATGGTGG ACAGCGGCCT GAAGCCCGTG AGCAACCCCT CGGCCATCTT CCTGTCCCGC CACGAGGACC CGGTGCCCGG CAGCGTGGTC ATGGTCACCC GGGAAGGCAC CCGCCCCCTG CTGGTGGAGG TGCAGGCCCT GGTCGCCGAG AGCCACGCCG CCCAGCCCCG GCGCATCACC GTGGGCCTGG AACAGAATCG CCTGAACATG CTGCTCGCCG TGCTGCACCG CCACGGCGGC ATCGCCCTGT TCGACCAGGA CGTGTTCGTC AACGTGGTGG GCGGCGTGCG GGTCACCGAG ACCGCCGCCG ACCTGCCCAT GCTGGCCGCA GCACTCTCCA GCTTTCGCAA CCGCCCCCTG CCCCAGGAAC TGGTGGTGTT CGGCGAGGTG GGCCTGGCCG GCGAGATCCG CCCCGTGCCC AACGGCGAGG AACGCCTGCG GGAGGCCGCC AAGCACGGCT ACACCCGCGC CATCGTCCCC GCCGGCAATG CGCCGCGCAA GCCCATCAAG GGGATGGAGG TGATCGGGGT GTCGAGACTC TCCCAGGTGC TGGATGCCCT CTAG
|
Protein sequence | MARAKTQYHC TACGAVHPKW GGQCADCGAW NTLEETIASA PAAAASPRFA GYAGEAATIR RLGDVVVEAE PRSGTGLSEL DRVLGGGLVH GSVVLIGGDP GIGKSTLLLQ TLAIMTGADG GAMNGLYVTG EESPQQVSLR ARRLGLPYED LKLLTETCAE RIIQHAQQAR PDIMVVDSIQ TLYTEQLQSA PGSVAQVRES SAQLVRFAKQ TGTALFIVGH VTKEGQLAGP RVLEHMVDTV LYFEGDPGGR YRVLRAVKNR FGAVNELGVF AMVDSGLKPV SNPSAIFLSR HEDPVPGSVV MVTREGTRPL LVEVQALVAE SHAAQPRRIT VGLEQNRLNM LLAVLHRHGG IALFDQDVFV NVVGGVRVTE TAADLPMLAA ALSSFRNRPL PQELVVFGEV GLAGEIRPVP NGEERLREAA KHGYTRAIVP AGNAPRKPIK GMEVIGVSRL SQVLDAL
|
| |