Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0827 |
Symbol | |
ID | 7315088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 892610 |
End bp | 893494 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643615706 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_002512905 |
Protein GI | 220934006 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.579615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCACG GCAGTATGGT GGCCCTGGTG ACGCCCATGG AGGCAGACGG TTCCGTCTCC GACGCATCCC TGGCGGAGCT GGTTGAGTTC CACATTCAGA AGGGCACCGA CGCCATCGTC GCCGTGGGCA CCACCGGCGA GTCCGCGACC CTGGATTTCG ACGAGCACTG CGAGGTCATC CGCAAGGTGG TGGATCGGGT GGCGGGGCGC ATCCCGGTGA TCGCCGGCAC CGGCGCCAAT TCCACCTCCG AGGCCATCGA ACTGACCCGC TGCGCGATGC AGGCCGGGGC CGATGCCTGC CTGCTGGTGA CCCCCTACTA CAACAAGCCG ACCCAGGAAG GCCTGTACCT GCACCACAAG GCCGTGGCCG AGGCGGTGCC CATCCCGCAG ATCCTCTACA ACGTCCCTGG CCGTACCGCA GTGGACATGC ACAACGACAC CGTGGTGCGC CTGGCGGAGA TCTCCAACAT CGTCGGCCTG AAGGATGCCA CCGGCGACCT GGACCGCGCC CGGGACCTGG TGGCCCGCTG CGGCGGGAAG ATCGACCTCT ACAGTGGCGA TGACGCCACC GCCATGGAGT TCCTGCTGCT GGGCGGCAAG GGCGTGATCT CGGTGACCGC GAACGTGGCC CCTGCCGAGA TGCACCAGAT GTGCGAGGCG GCGATGCGCG GCGATCGTGC AGCCGCCGAG GCCATCAATG CCCGCATCGA CCTGCTGCAC CGCAACCTGT TCCTGGAAGC CAATCCGATC CCCGTGAAGT GGGCCCTGGA GCAGATGGGT CTGATCCCCC CGGGGATACG TCTGCCCCTG ACCCGCCTGT CCGAACGCTT CCATGCCCCC GTGCGCGAGG CCCTCGCCGC CGCGGGCATC ACCCTCAACG CCTGA
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Protein sequence | MFHGSMVALV TPMEADGSVS DASLAELVEF HIQKGTDAIV AVGTTGESAT LDFDEHCEVI RKVVDRVAGR IPVIAGTGAN STSEAIELTR CAMQAGADAC LLVTPYYNKP TQEGLYLHHK AVAEAVPIPQ ILYNVPGRTA VDMHNDTVVR LAEISNIVGL KDATGDLDRA RDLVARCGGK IDLYSGDDAT AMEFLLLGGK GVISVTANVA PAEMHQMCEA AMRGDRAAAE AINARIDLLH RNLFLEANPI PVKWALEQMG LIPPGIRLPL TRLSERFHAP VREALAAAGI TLNA
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