Gene Tgr7_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0807 
Symbol 
ID7315068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp871617 
End bp874028 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content67% 
IMG OID643615686 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_002512885 
Protein GI220933986 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCT GGCAATGGCT GCAGGCTTCG CTGCAGCGCA AGCTCAGCGC CTCCCTGGTC 
CTGGTCCTGG TGCTGTCGCT GGGCCTGGCG GTGTTCGTGG GCCTGCGCCA GGTGGATCGC
TTCGCCGAAG AACAGTTGCG GGCGCAGCAG AGCGACCTGC CCCTGTGGAT CAACGCGGCC
TTCAGCACCC GGGTGTTCGA GCAGGACTAC GGCGCGCTGG CGGACCTGGC CTTGCGCATG
GTGTCCACTG GCAAAGGCGC GGTGGTCTAC GTGCAGGTGG AGGATCTGTC CGGTCGCATC
TACGCCAGCG CCGGCGCGGT GCCGGACTGG CTGCAGGCAG ATCAGGGGCC GGAGGCCGAC
GTCTCCTCCA TCCATCATGC CCGCGTCCCG CTGACGCTTG GCGGCATGGA CGTGGGGCAG
GTCTTCATCG GGTCGTCCCT GGAGGCGGAG GAGGCGGCCC GCTCGCGCCT GCTGATGGAT
AGCCTGCTGG TGGTCCTGGT GGTGCTGCCC CTGGGGTTGC TGCTGCTGGG CACGGTCGGG
CACCGCATGG TGAGGCGGGT CGCGCATCTG GCCGCGAGCG CCCGAGCCGT CAGTGCAGGC
CATTACGATG TGTCGCTCCC GGCCAGGGGG CATGACGAAG TGGGCCAGCT GGCCGAGGCG
TTCCGCGCCA TGGTCTCCTC GGTGCGCACC CGCGAGGTGG AGCTGACCGA GGCCCATCGC
CAGGCCGAGC GTCTTACCGG GCTTGCCCGC CAGGAGCAGG GCCGGCTGCG TTCCCTGCTC
TCGGCCATGA ACATCGGCGT GCTGTTCGAG ACCCATGATC ACCGGGTGGA GTACTACAAC
CCCGCGTTCC AGAACATCTG GGGTATCCCC CGGGACACCA ACCTGACCGG CATGCCCACC
CAGGACGTGC TGGAACTGGC GGCCCACTTC GAGTCCCGCC CTGATCACAG CTCGCGCCAC
ATCCTACAGG TCCTGGACAC CCACGAATCC AGCGAACGCT TCGAGACGGA GCTCAACGAC
GGGCGGCTGA TCACCCAGAT CTCCTACCCG GTGCTGGACA ACGACGGCAA CAGCCTGGGC
CGCCTGTGGA TCTACGAGGA CGTCACCCAC GAGCGCCAGA CCGCCGAGCA GCTGCTCTAC
CTGGCGGAGC ACGACGCCCT CACCGGCCTG TGCAACCGCC ATTGCTTCGA GCAGCGCCTG
GAGAAGGCCA TGGCCTCCGC CCAGCGCCAT CATCACCGGC TCGCGCTGCT GTACTTCGAC
CTGGACGAAT TCAAGGCCAT CAACGACAGC TTCGGGCATC GTGCCGGTGA CGCGGTGCTG
GTGCGGGTGG CGAGCGAACT GGCCCCGGTG GTGCGCGGCG GCGACATGCT GGCGCGGGTG
GGTGGCGACG AGTTCGCCCT GCTCACCCAG ATCGACTCCA TCGAGGAGGC CCGCAGCCTC
GCCGCGAGGC TCTGCGGGAC CGTCGCCAAG ATCCCGTTCC GCTTCCGGGG CACCGGGGTG
CGCAGCACCG CCAGCGTCGG CATCGCTGTC TATCCGGAGC ACGGCGAGAC CACCGAGGAC
CTGGTCGCCC GGGCGGATAT CGCCATGTAC CAGGCCAAGG GTCTGGGCAA GAACACCTGG
TCGGTGTACG ACCCGGAGCG CGACCGTTCC GAGGCAGTGG CTGAGCGCCT GAGCTGGGGC
GACCGCATCC GCATGGCCCT GGAGCAGGAC CTGCTCCTGC TGCACTACCA GGGCGTCTAT
GACGCGGCCA GCGGCGAGCT GGTGCACATG GAGGCCCTGG CGCGCATTCG CGACCCCCGG
GACCTGGAGC GCATCCTGAT GCCCGGACAG TTCGTGCCCA TCGCGGAGAA GACCGGGCTG
ATCCTCGCCC TGGACCGGCG CGTGCTGGAA CTGGGCATCG CCCAGTTGGC GGATAATCCG
GACATGCCTC CCCTGGCGGT GAATATCTCG GGCCGTTCCT TTGATGATCC GGCCCTGGCC
GATGCCATCC GGGAACTGAT CGCACGCCAC CGGGTGGATC CATCGCGGCT CATCATCGAG
CTCACCGAAA CCGCCGCGGT CTCCGAGATC CAGGAGGCCC AGCGCTTCAT CGAGTCCATG
CACCGGCTGG GCTGCAAGGT GTGCCTGGAT GACTTCGGCG CCGGCTTTTC CTCGTTCGCC
TATCTCAAGT ACATCGATGT GGACATGCTC AAGATCGATG GCATGTTCGT GCGTGACCTG
ACCCGCGACA GGGAGAACCA GGTGTTCGTG CGCGCCATGG TGGACGTGGC CAAGGGGCTG
GGCAAACGCA CCGTGGCGGA ATTCGTCGAG GATGCCGCCA CCCTGGAGAT GCTCAATACC
CTCGGCGTGG ACATGGCCCA GGGCTATCAC CTGCACCGTC CCGGGCCGCA TCTGCTGCAG
AAATCCGCCT GA
 
Protein sequence
MSLWQWLQAS LQRKLSASLV LVLVLSLGLA VFVGLRQVDR FAEEQLRAQQ SDLPLWINAA 
FSTRVFEQDY GALADLALRM VSTGKGAVVY VQVEDLSGRI YASAGAVPDW LQADQGPEAD
VSSIHHARVP LTLGGMDVGQ VFIGSSLEAE EAARSRLLMD SLLVVLVVLP LGLLLLGTVG
HRMVRRVAHL AASARAVSAG HYDVSLPARG HDEVGQLAEA FRAMVSSVRT REVELTEAHR
QAERLTGLAR QEQGRLRSLL SAMNIGVLFE THDHRVEYYN PAFQNIWGIP RDTNLTGMPT
QDVLELAAHF ESRPDHSSRH ILQVLDTHES SERFETELND GRLITQISYP VLDNDGNSLG
RLWIYEDVTH ERQTAEQLLY LAEHDALTGL CNRHCFEQRL EKAMASAQRH HHRLALLYFD
LDEFKAINDS FGHRAGDAVL VRVASELAPV VRGGDMLARV GGDEFALLTQ IDSIEEARSL
AARLCGTVAK IPFRFRGTGV RSTASVGIAV YPEHGETTED LVARADIAMY QAKGLGKNTW
SVYDPERDRS EAVAERLSWG DRIRMALEQD LLLLHYQGVY DAASGELVHM EALARIRDPR
DLERILMPGQ FVPIAEKTGL ILALDRRVLE LGIAQLADNP DMPPLAVNIS GRSFDDPALA
DAIRELIARH RVDPSRLIIE LTETAAVSEI QEAQRFIESM HRLGCKVCLD DFGAGFSSFA
YLKYIDVDML KIDGMFVRDL TRDRENQVFV RAMVDVAKGL GKRTVAEFVE DAATLEMLNT
LGVDMAQGYH LHRPGPHLLQ KSA