Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0805 |
Symbol | |
ID | 7315066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 868343 |
End bp | 870463 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643615684 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_002512883 |
Protein GI | 220933984 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATC ATGCCGTGAC ACGCAACGGA TCGTCCCCAT CCCGCAGCCT GGCGGGTCGG CTGGCCCTGA GGATCGTCGT CGTCTACCTG GTCATGGGTA TCCTGTGGAT CGCCCTCTCT GACCGCGCCC TGGCCATGCT GGTGGACGAT CCGGTGCTGC TCACCTGGCT GCAGACCTTC AAGGGCTGGG CCTACGTACT GGTCACCGCG CTGCTGCTCT ACGGCCTGAT CGCCTGGCAG ATGCACGTCC TGGCCCAGGC CAACGTGCGG CTCGAGGAGC GCGGCCTGCA CATCGCCCGG CTCAACCGGG TGCACGCCAT GCTCAGCGCC ATCAACGGCG CCATCCTGCG TATACGCCAC AGGGACAGCC TGTTGCGGGA GTCCTGCCGC ATCGCCGTGG ACACCGGCGG TTTCGATCTT GCCTGGGTGG GGCTGGTGAA CGCGGATGCT CGCACCCTGA GCCCGGTGGC CAGTGCCGGC GATGCCCTGG ACTGTCTGGA CGGCTTGAGC CTTTGCATCG CCTCCGGAGA CCCTGACGCC CACCCCATGG CTGCGGACCT GTGCGCCAGG TTGCCCTTCG TGGTCAATGA ACTGAGCGCC ATTCCCCCCA TGGATGAGTG TCACAGCCGC GCCGTGGCGA GGGGCTTCCG GGCCATGGCC GTGGTGCCCT TCTTCAACGG ATCGCAACTG CTGGGCGTGC TGGGTTTCCT GTCCCGTCAG GCCACGGTGT TCGATGCCGA CGAACTGCAA CTGCTCACCG AGGTGGCCGC CGACACGGGC CTGGGCCTGA TGATCATCGA CCAGGCCCAG GCCCTGGAGC GTTCCACCCG TTACGATCCT CTCACCGGCC TGCCCAACCG CGGCCTGCTG GAGGAGCGCA TCGGCCAGGC CTTGCTGCGC GCGCGGCATC ACCGCCGCTA CATCGGCGTG ATGGCCCTGG AAGTGCTGGG GCTGCGCGCG GTGATCGACT CCCTGGGCCG TCAGCAGGGG GACCGTCTGC AGCAGGTGGT GGCGAGAAGG CTGCTCAGCC GCCTGCGCGA GGGCGATACC GTGGCGCACC TGGGCAACGG CGAGTTTGCC CTGCTGCTCT GCGACCTGCG CATGGGCATG GATGTCTCGG AGGTGGCCGA CAAGCTGCTG GAGCCCTTTG AACTGGAGAT GGGCGGTGAC CTGCCGCCCC TGCACGTGAA GCTCTCCGCC GGTGCCGCGG TCTATCCCGG GGATGCGGAG TCCGGGCCGG AACTGCTGCA TTGCGCCGGC GTGGCGCTGC ACCAGGGGGG TGCCCAGTCC CATGCCGGGC GCTGCGTGTT CTATGCGCGG GAGATGGATG AGCGGGTGCG AGAGTACCAG GCCCTGGACA ACGAGCTGCA GGGCGCCCTG CAGCGGGACG AGATGCACCT GCATTACCAG CCCATCGTCA ATACCCGGGA CGGCAGCGTG CTCGGCGTCG AGGCCCTGTT GCGCTGGGAC AACCGCCGTT TCGGCAGCGT CTCGCCGGGA CGCTTCATCC CCATGGCGGA GCATTCCGGC CTGATCCTCT CCCTGGGTGA ATGGGTGCTG GAGCAGGCCT GTGCCCAGAT CGCCCACTGG CGTGCGCAGG GTTGGAATCA CCTGCACATG AGCGTGAACC TCTCCGCCCG CCAGTTGCTC ACGCCGGGTT TCGACACCCA GGTGGTGAAG GTGCTGGAGC GCCATGGGCT GGATAAAGAC GACATGCCCC TGGTGCTGGA GGTGACCGAG ACGGCGGTGA TCGAGGACAT GGAACAGGTT TCCGAGGCCC TGTTCCGGCT CAAGCGACTG GGCATTGCCG TGCACCTGGA CGACTTCGGC ACCGGCTATG CCTCCCTGAG CTACCTGCAC CGTCTGCCGG TGGATGCGCT CAAGATCGAT CAGAGCTTCG TGCGCGGGCT GGGCGGCGAT CCGGTGGCGG AGAACCTCAT CCGCACCCTC GTGGTGCTGG CCGAGCGGCT GGACCTGAGC CTGGTGGCCG AGGGGGTTGA GACCGACGAA CAGCGGGACA TCCTCCGGCG TCTGGGCTGT GATGTGGCCC AGGGTTACCT GTTCGCTCGC CCGGCGCCCG CCGAGCAGAT CGAGGGCCTG TTCCCCGCGC CTCAGGGCTG A
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Protein sequence | MEHHAVTRNG SSPSRSLAGR LALRIVVVYL VMGILWIALS DRALAMLVDD PVLLTWLQTF KGWAYVLVTA LLLYGLIAWQ MHVLAQANVR LEERGLHIAR LNRVHAMLSA INGAILRIRH RDSLLRESCR IAVDTGGFDL AWVGLVNADA RTLSPVASAG DALDCLDGLS LCIASGDPDA HPMAADLCAR LPFVVNELSA IPPMDECHSR AVARGFRAMA VVPFFNGSQL LGVLGFLSRQ ATVFDADELQ LLTEVAADTG LGLMIIDQAQ ALERSTRYDP LTGLPNRGLL EERIGQALLR ARHHRRYIGV MALEVLGLRA VIDSLGRQQG DRLQQVVARR LLSRLREGDT VAHLGNGEFA LLLCDLRMGM DVSEVADKLL EPFELEMGGD LPPLHVKLSA GAAVYPGDAE SGPELLHCAG VALHQGGAQS HAGRCVFYAR EMDERVREYQ ALDNELQGAL QRDEMHLHYQ PIVNTRDGSV LGVEALLRWD NRRFGSVSPG RFIPMAEHSG LILSLGEWVL EQACAQIAHW RAQGWNHLHM SVNLSARQLL TPGFDTQVVK VLERHGLDKD DMPLVLEVTE TAVIEDMEQV SEALFRLKRL GIAVHLDDFG TGYASLSYLH RLPVDALKID QSFVRGLGGD PVAENLIRTL VVLAERLDLS LVAEGVETDE QRDILRRLGC DVAQGYLFAR PAPAEQIEGL FPAPQG
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