Gene Tgr7_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0805 
Symbol 
ID7315066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp868343 
End bp870463 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content68% 
IMG OID643615684 
Productdiguanylate cyclase/phosphodiesterase with GAF sensor 
Protein accessionYP_002512883 
Protein GI220933984 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATC ATGCCGTGAC ACGCAACGGA TCGTCCCCAT CCCGCAGCCT GGCGGGTCGG 
CTGGCCCTGA GGATCGTCGT CGTCTACCTG GTCATGGGTA TCCTGTGGAT CGCCCTCTCT
GACCGCGCCC TGGCCATGCT GGTGGACGAT CCGGTGCTGC TCACCTGGCT GCAGACCTTC
AAGGGCTGGG CCTACGTACT GGTCACCGCG CTGCTGCTCT ACGGCCTGAT CGCCTGGCAG
ATGCACGTCC TGGCCCAGGC CAACGTGCGG CTCGAGGAGC GCGGCCTGCA CATCGCCCGG
CTCAACCGGG TGCACGCCAT GCTCAGCGCC ATCAACGGCG CCATCCTGCG TATACGCCAC
AGGGACAGCC TGTTGCGGGA GTCCTGCCGC ATCGCCGTGG ACACCGGCGG TTTCGATCTT
GCCTGGGTGG GGCTGGTGAA CGCGGATGCT CGCACCCTGA GCCCGGTGGC CAGTGCCGGC
GATGCCCTGG ACTGTCTGGA CGGCTTGAGC CTTTGCATCG CCTCCGGAGA CCCTGACGCC
CACCCCATGG CTGCGGACCT GTGCGCCAGG TTGCCCTTCG TGGTCAATGA ACTGAGCGCC
ATTCCCCCCA TGGATGAGTG TCACAGCCGC GCCGTGGCGA GGGGCTTCCG GGCCATGGCC
GTGGTGCCCT TCTTCAACGG ATCGCAACTG CTGGGCGTGC TGGGTTTCCT GTCCCGTCAG
GCCACGGTGT TCGATGCCGA CGAACTGCAA CTGCTCACCG AGGTGGCCGC CGACACGGGC
CTGGGCCTGA TGATCATCGA CCAGGCCCAG GCCCTGGAGC GTTCCACCCG TTACGATCCT
CTCACCGGCC TGCCCAACCG CGGCCTGCTG GAGGAGCGCA TCGGCCAGGC CTTGCTGCGC
GCGCGGCATC ACCGCCGCTA CATCGGCGTG ATGGCCCTGG AAGTGCTGGG GCTGCGCGCG
GTGATCGACT CCCTGGGCCG TCAGCAGGGG GACCGTCTGC AGCAGGTGGT GGCGAGAAGG
CTGCTCAGCC GCCTGCGCGA GGGCGATACC GTGGCGCACC TGGGCAACGG CGAGTTTGCC
CTGCTGCTCT GCGACCTGCG CATGGGCATG GATGTCTCGG AGGTGGCCGA CAAGCTGCTG
GAGCCCTTTG AACTGGAGAT GGGCGGTGAC CTGCCGCCCC TGCACGTGAA GCTCTCCGCC
GGTGCCGCGG TCTATCCCGG GGATGCGGAG TCCGGGCCGG AACTGCTGCA TTGCGCCGGC
GTGGCGCTGC ACCAGGGGGG TGCCCAGTCC CATGCCGGGC GCTGCGTGTT CTATGCGCGG
GAGATGGATG AGCGGGTGCG AGAGTACCAG GCCCTGGACA ACGAGCTGCA GGGCGCCCTG
CAGCGGGACG AGATGCACCT GCATTACCAG CCCATCGTCA ATACCCGGGA CGGCAGCGTG
CTCGGCGTCG AGGCCCTGTT GCGCTGGGAC AACCGCCGTT TCGGCAGCGT CTCGCCGGGA
CGCTTCATCC CCATGGCGGA GCATTCCGGC CTGATCCTCT CCCTGGGTGA ATGGGTGCTG
GAGCAGGCCT GTGCCCAGAT CGCCCACTGG CGTGCGCAGG GTTGGAATCA CCTGCACATG
AGCGTGAACC TCTCCGCCCG CCAGTTGCTC ACGCCGGGTT TCGACACCCA GGTGGTGAAG
GTGCTGGAGC GCCATGGGCT GGATAAAGAC GACATGCCCC TGGTGCTGGA GGTGACCGAG
ACGGCGGTGA TCGAGGACAT GGAACAGGTT TCCGAGGCCC TGTTCCGGCT CAAGCGACTG
GGCATTGCCG TGCACCTGGA CGACTTCGGC ACCGGCTATG CCTCCCTGAG CTACCTGCAC
CGTCTGCCGG TGGATGCGCT CAAGATCGAT CAGAGCTTCG TGCGCGGGCT GGGCGGCGAT
CCGGTGGCGG AGAACCTCAT CCGCACCCTC GTGGTGCTGG CCGAGCGGCT GGACCTGAGC
CTGGTGGCCG AGGGGGTTGA GACCGACGAA CAGCGGGACA TCCTCCGGCG TCTGGGCTGT
GATGTGGCCC AGGGTTACCT GTTCGCTCGC CCGGCGCCCG CCGAGCAGAT CGAGGGCCTG
TTCCCCGCGC CTCAGGGCTG A
 
Protein sequence
MEHHAVTRNG SSPSRSLAGR LALRIVVVYL VMGILWIALS DRALAMLVDD PVLLTWLQTF 
KGWAYVLVTA LLLYGLIAWQ MHVLAQANVR LEERGLHIAR LNRVHAMLSA INGAILRIRH
RDSLLRESCR IAVDTGGFDL AWVGLVNADA RTLSPVASAG DALDCLDGLS LCIASGDPDA
HPMAADLCAR LPFVVNELSA IPPMDECHSR AVARGFRAMA VVPFFNGSQL LGVLGFLSRQ
ATVFDADELQ LLTEVAADTG LGLMIIDQAQ ALERSTRYDP LTGLPNRGLL EERIGQALLR
ARHHRRYIGV MALEVLGLRA VIDSLGRQQG DRLQQVVARR LLSRLREGDT VAHLGNGEFA
LLLCDLRMGM DVSEVADKLL EPFELEMGGD LPPLHVKLSA GAAVYPGDAE SGPELLHCAG
VALHQGGAQS HAGRCVFYAR EMDERVREYQ ALDNELQGAL QRDEMHLHYQ PIVNTRDGSV
LGVEALLRWD NRRFGSVSPG RFIPMAEHSG LILSLGEWVL EQACAQIAHW RAQGWNHLHM
SVNLSARQLL TPGFDTQVVK VLERHGLDKD DMPLVLEVTE TAVIEDMEQV SEALFRLKRL
GIAVHLDDFG TGYASLSYLH RLPVDALKID QSFVRGLGGD PVAENLIRTL VVLAERLDLS
LVAEGVETDE QRDILRRLGC DVAQGYLFAR PAPAEQIEGL FPAPQG