| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0786 |
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| Symbol | |
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| ID | 7315047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 845507 |
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| End bp | 846718 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643615666 |
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| Product | type IV pilin biogenesis protein PilC |
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| Protein accession | YP_002512865 |
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| Protein GI | 220933966 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.447941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA CCCAGAACAT CACCTTCCAG TGGGAAGGAC TCGACAAGAA GGGCAGTCGA
GTCAAGGGCG AGACCACCGC GACCAGCGAA CTCCTCGCCC GCGCGGAACT TCGTCGTCAG
GGCATTAACC CGACCAGGGT CCGCAAAAAG CCCAAATCAC TATTCGGCGG CAAGAAAAAG
ATTGTTCCGA AGGATATCGC CGTCTTTTTG CGCCAGATGG CCACCATGAT GGAAGCAGGC
GTGCCCCTGG TACAGGCCTT TGACATCGTC GGAAGAGGAC ATGAAAACCC CTCCATGCAG
GAGCTGATCC TGGCCATGAA GTCCGACGTG GAAGGTGGCA CGACCTTCTC TGCGGCACTG
GGCAAGCACC CCAAGTACTT CGACGACCTT GTGGTCAACC TGGTCAATGC CGGCGAACAG
GCCGGCGCAC TCGAAACCCT CCTGGACAAG ATCGCCACCT ACAAGGAAAA GACCGAGTCC
CTCAAAGCCA AGATCAAAAA GGCCCTGTTC TACCCCACTG CGGTGCTGGT GGTGGCTTTC
ATCGTGACCG CAATTCTTCT GATATTCGTG GTACCCCAGT TCCAGGACCT GTTTCAGGGA
TTTGGCGCAG ACCTGCCCGT TTTCACCCAG TTCGTGATCG GTATTTCTGA GTTCTTCCAA
TCCTATTGGT GGGCAATCTT CGGCGGATTG ATTGGTGCCG TTGTGCTCTT CAAGCAGGCC
CATTTACGTT CTCCCGGTTT CCGGCGCTGG CTGGATCTCA TGTCTCTCAA GATTCCCGTC
ATCGGAGAGC TGCTGCGCAA GGCCTCCATC GCCCGATTCG CACGTACACT CTCCACCATG
TTCGCAGCCG GCGTGCCGCT GGTGGAAGCC ATGGAATCCG TGGCCGGCGC AACCGGCAAT
GCCCTGTACC GCGAGGCCAC CTTGCGCATC CGAGACGAAA CCGCCGCCGG CACTCAGCTT
CAGGCCGCCA TGCGCAACAC GGCCCTGTTC CCCAACATGG TGGTCCAGAT GGTGGCCATC
GGCGAGGAAT CCGGTGCCCT GGACGACATG TTGGACAAGG TCGCCGACTT CTACGAGGAA
GAAGTGGACA ACATGGTGGA CAGCCTCTCG AGCCTCATGG AGCCCATGAT CATGGCCTTC
CTGGGCGTCG TGGTGGGCGG CCTTGTGATT GCCATGTACC TGCCGATCTT CCAGCTGGGC
GCAGTGGTGT AG
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| Protein sequence | MAETQNITFQ WEGLDKKGSR VKGETTATSE LLARAELRRQ GINPTRVRKK PKSLFGGKKK
IVPKDIAVFL RQMATMMEAG VPLVQAFDIV GRGHENPSMQ ELILAMKSDV EGGTTFSAAL
GKHPKYFDDL VVNLVNAGEQ AGALETLLDK IATYKEKTES LKAKIKKALF YPTAVLVVAF
IVTAILLIFV VPQFQDLFQG FGADLPVFTQ FVIGISEFFQ SYWWAIFGGL IGAVVLFKQA
HLRSPGFRRW LDLMSLKIPV IGELLRKASI ARFARTLSTM FAAGVPLVEA MESVAGATGN
ALYREATLRI RDETAAGTQL QAAMRNTALF PNMVVQMVAI GEESGALDDM LDKVADFYEE
EVDNMVDSLS SLMEPMIMAF LGVVVGGLVI AMYLPIFQLG AVV
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