| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0785 |
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| Symbol | |
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| ID | 7315046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 844532 |
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| End bp | 845398 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615665 |
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| Product | type IV pilus prepilin peptidase PilD |
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| Protein accession | YP_002512864 |
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| Protein GI | 220933965 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.460819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC TCCTGCAAAC CAGCACGGCG GCACTGCTGA CCGTCACCGC ACTGTTCAGC
CTGCTGGTGG GCAGCTTTCT CAATGTGGTG ATTCATCGTC TGCCGGTGAT GATGGAGCGG
CAGTGGCGGC GTGAAGCCAC GGAATTCCTG TACGCCGAGG GCCAGACGCT TGCGCCAGCC
GAGCAGGGGC CCGCCTACAA CCTCTGGAGC CCCCGTTCCG CCTGTCCCCA GTGCGGTCAC
AAGATCACCG CGCTGGAGAA CATCCCGATC CTCAGCTACC TGCTCCTGCG CGGCCGTTGC
AGCGAGTGCG GCACCTCGAT TCCGCTGCGC TACCCGCTGG TGGAGGCGGC CACGGCTCTG
TTGTCCGTGG TAGTGGTCTG GCACTTCGGC TTCACCTGGC AGTCGGGGGC CGCGCTGCTG
CTCACCTGGG CACTGATCGC GCTGGCGGTC ATCGACCTGC GCACCACCCT GCTCCCGGAC
AGCATCACCC TGCCCTTCCT CTGGATCGGC CTGTTACTCA ACCTGGGCGG CCTGTTCACC
GACGCCACCA GCAGCCTGAT CGGCGCCGTG GCCGGTTACC TGAGCCTCTG GCTGGTGTAT
CACGGCTTCA AGCTGCTCAC CGGCAAGGAA GGCATGGGCT TCGGCGACTT CAAGCTCTTC
GCCCTCATCG GCGCCTGGCT CGGCTGGCAG CTGCTGCCCC TGGTGATCCT GCTCTCATCC
CTGGTAGGCG CCGTGGTGGG CATCGCGCTG ATCCTGTTCC GCGGCCGCGA CCGCGCCCAT
CCCATGCCCT TCGGCCCCTA CCTGGCAGCG GCCGGCTGGA TCGCGCTGCT GTGGGGCAAC
GACATCATGG CGCTGTACCT CGGGTAG
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| Protein sequence | MIELLQTSTA ALLTVTALFS LLVGSFLNVV IHRLPVMMER QWRREATEFL YAEGQTLAPA
EQGPAYNLWS PRSACPQCGH KITALENIPI LSYLLLRGRC SECGTSIPLR YPLVEAATAL
LSVVVVWHFG FTWQSGAALL LTWALIALAV IDLRTTLLPD SITLPFLWIG LLLNLGGLFT
DATSSLIGAV AGYLSLWLVY HGFKLLTGKE GMGFGDFKLF ALIGAWLGWQ LLPLVILLSS
LVGAVVGIAL ILFRGRDRAH PMPFGPYLAA AGWIALLWGN DIMALYLG
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