| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0778 |
|---|
| Symbol | |
|---|
| ID | 7315039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 836026 |
|---|
| End bp | 836943 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615658 |
|---|
| Product | Peptidase M23 |
|---|
| Protein accession | YP_002512857 |
|---|
| Protein GI | 220933958 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.266342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA TCTTTCTCAG CCGAAGCGGC ACCTGCCGCA AGTGTCTGGA CCTGCATTCC
TGGCGAGTGC GGGCCGTGGC TGTGATGGTC ATCGGCGGCC TCCTGTCCCT GGTGGCGGCG
GCGGGTTTCC ATGCCGGCGC CCGTCATGCA GATCCCCAAC AGTTCATCGT CGCCTGGGAG
GAGGAAATCC GTCTCCAGCG CGAGGCCCTG CGCACGGCCA GGGAAGCCAC CCAGGCTGAC
ATCGACGCCC TGACTATCCG CCTGGCCGAA CTGCAGGCCC GCGCCACCCG CCTGGACGCC
CTGGGCGGCA AACTGGTCAA CATGGCCGGT CTGGATGACG GCGAGTTCGA TTTCAGCAGC
ATTCCCGGCG TGGGCGGTCC CGAGATGGCC GAACCAGGTG TGGGGCATGC CCCGGACCTG
ATCGCCCAGC TGGACGGTCT GGACAGCCTG CTGGAGGAAC GGGAGTCCCA GCTGGGCCTG
CTGGATCGCA TGATCCTCAA CCGCCAGCTC CAGGAAGAGG TGACCCCGGC GGGCCGGCCC
GTGAACCAGG GCTGGATTTC CTCCAGCTAC GGCATGCGCA ACGACCCCTT CACGGGGCGC
CGCGTAATGC ACCGAGGTGT CGATTTCGCC GGCCGGCCAG GCAGTGACGT GATCGCCGTG
GCCGGTGGCA TCGTCACCAC TGCCGGCAAG CGCAACGTGT TCGGATACCT GGTGGAGATC
GACCACGGCA ACGGCTTCGT CACCCGCTAC GCCCACAACA AGAAACTGTT GGTGGAGACG
GGCGAGACGG TGCGCAAGGG TCAGGTGATC GCCCTGCTGG GCGAGACCGG TCGCGCAACC
GGTCCCCACG TGCATTTCGA GGTGCTGGAA AACGGCCGGC ACATCAATCC CTCCCGCTTC
ATCCGCGCCT CCCGCTGA
|
|---|
| Protein sequence | MNIIFLSRSG TCRKCLDLHS WRVRAVAVMV IGGLLSLVAA AGFHAGARHA DPQQFIVAWE
EEIRLQREAL RTAREATQAD IDALTIRLAE LQARATRLDA LGGKLVNMAG LDDGEFDFSS
IPGVGGPEMA EPGVGHAPDL IAQLDGLDSL LEERESQLGL LDRMILNRQL QEEVTPAGRP
VNQGWISSSY GMRNDPFTGR RVMHRGVDFA GRPGSDVIAV AGGIVTTAGK RNVFGYLVEI
DHGNGFVTRY AHNKKLLVET GETVRKGQVI ALLGETGRAT GPHVHFEVLE NGRHINPSRF
IRASR
|
|---|
| |