| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0772 |
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| Symbol | ddl |
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| ID | 7315033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 829873 |
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| End bp | 830802 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643615652 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002512851 |
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| Protein GI | 220933952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.170719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCA GGTCCTTCGG CAAGGTGGCG GTGCTCCTGG GCGGCTGGTC CGCGGAACGG
GAGATCTCGC TCATCAGCGG CGGCGAGGTG CTCAAGGCCC TGCAGGCCGC CGGCGTGGAC
GCCCACGGCA TCGATGCCGG CCGGGACGTG CTGGAGGTGC TCAAGGCCGG CGGTTTCGAC
CGGGTGTTCA ACATGCTCCA CGGGCGGGGC GGCGAGGACG GCGTGATCCA GGGCGCCCTG
GAGCTGATCG GCCTGCCCTG CACCGGCAGC GGCGTGCTGG GCTCGGCGGT GAGCATGGAC
AAGCTCATGA CCAAGCGCCT GTGGCGCGGC GCGGGCCTGC CCACCCCCGA TTACCAGGTG
CTGGACGGGG ACACGGACTG GGTGGTGGTG GCCTCGGGCC TGGGCCTGCC GCTGATCGTC
AAGCCGGCCC TGGAGGGCTC GAGCATCGGC ATGAGCAAGG TGGAGACCGT GGGTGATCTG
CCCGAGGCCT ATGCCCGTGC CGCCGCTTGC GGCGGGCCGG TGTTCGCCGA GCGCTGGGTG
ACCGGCACCG AGTACACGGC GGCGATCCTC GAGGGCGAGC CCCTGCCGCT GATCCGCCTG
GAGACGCCCC GGGCCTTCTA CGACTACGAG GCCAAGTACA AGGCCGAGAC CACCCGCTAC
CACGTGCCCT GCGGGCTGGA GGCGGCGGTG GAACAGCGCT TCCAGTCCCT GGCCCTGCAG
GCCTTCGAGG CGGTGGGCGC CCGGGGCTGG GGCCGGGTGG ACCTGATGGT GGACCGGGTG
GGTGTGCCCT GGCTGATCGA GGTGAACACC GTGCCCGGCA TGACCGACCA CAGCCTGGTG
CCCATGGCGG CCCGGGCCGC GGGCCTGGAT TTCCAGGCCC TGGTGCTGCG CATCCTGGCC
GGCACCCTGG CTTCCGGGGA GCGGCAATGA
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| Protein sequence | MNPRSFGKVA VLLGGWSAER EISLISGGEV LKALQAAGVD AHGIDAGRDV LEVLKAGGFD
RVFNMLHGRG GEDGVIQGAL ELIGLPCTGS GVLGSAVSMD KLMTKRLWRG AGLPTPDYQV
LDGDTDWVVV ASGLGLPLIV KPALEGSSIG MSKVETVGDL PEAYARAAAC GGPVFAERWV
TGTEYTAAIL EGEPLPLIRL ETPRAFYDYE AKYKAETTRY HVPCGLEAAV EQRFQSLALQ
AFEAVGARGW GRVDLMVDRV GVPWLIEVNT VPGMTDHSLV PMAARAAGLD FQALVLRILA
GTLASGERQ
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