Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0765 |
Symbol | |
ID | 7315026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 821462 |
End bp | 822838 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643615645 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
Protein accession | YP_002512844 |
Protein GI | 220933945 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATCT GGTCGCTCGC CGAGATCGCG TCGAAGGTCG GCGGTGAACT GCACGGCGGT GATACTGTGG CCGAGGGGGT CAGCACCGAC ACCCGCAGCC TGCAGCACGG CCAGCTGTTC GTGGCGCTCA CCGGCCCGAC CTACGATGGC CATGCCTTCG TCAGCGACGA CCTGCCTGCC GCAGGTGTCA TGGTCAGCCG CCTGCTGCCC ACGCGCCTGC CCCAGGTGCT GGTGGACGAC ACCCGTCTCG CCCTGGGACG CCTGGCCCGG GCCTGGCGCG AATCCCTGCC GGTCACGGTG CTGGCGCTCA CCGGCAGCAA CGGCAAGACC ACGGTCAAGG AGATGCTCTC GGCCATCGCC CGGGAGCATG CCCCCACCCT CGCCACCCGA GGCAATCTGA ATAACGACAT CGGCGTGCCC CTGACCCTGC TGGAGATGGC CCGCAACCAC CGTTACGCGG TGGTGGAGAT GGGCGCCAAC CATCACGGCG AGATCGCCTA TCTCACCAGC CTCGCCCGCC CCGACGTGGC CCTGATCACC AATGCCGGAC CCGCCCACCT GGAGGGCTTC GGTTCCATCG AGGGGGTCTC CCGGGCCAAG GGCGAGATCT ACTCGGGCCT GGGTCCCGAC GGCGTGGCGG TGATCAACGC CGACGACATC TACGCCGACT ACTGGTACGG CCTGAATCCA GGGCGACGCG TCATCAGTTT CGGACTGGAT CATGTGGCCG AGGTCTCCGG CGAGTGGCAG GCGCCTGGCA GTCTGCGTCT GCACATGAAT GGCCGGGTGC ATGCCCTGGA GCTGGCCTTC CCCGGTCGCC ACAACGCCCT CAACGCCCTG GCCGCCGCGG CCGCGGCGTT GGGTGCGGAG ATCCCCGAGG AGGCCATCCT GCGCGGTCTT GCCCGGGTAC ACCCGGTGAG CGGACGCCTG GTGGCGGTGC CGGGGCGGGG CGGTGCACTG CTGCTGGACG ACAGTTACAA CGCCAACCCC GCCTCCACCC GCGCCGCACT GGAAGTGCTG TCCGGTCATG GCGGCGAGCG CTGCATGGTG CTGGGTGACA TGGGCGAACT GGGCGATGAA GGTGAAACCC TGCATGCCGA GATCGGCGCC CGGGCACGGG AACTGGGCAT CGAGCATTTT CATGCCGTGG GCCCGCTCAG TGCCCACGCG GTGCGTGCCT TCGGGGAGGG GGCGCAGCAC CACCCCGACC AGGCCGCGCT CATCGAGGCC CTGCGCCCGA TGTTGCATGC CGGCATGACC GTGCTGGTGA AGGGCTCGCG CAGCGCGCGC ATGGAGCGGG TGGTGCAGGC CCTGCAGGCG GACACGAACA ACAATCACAA TAACGGGGGG GCTGCGCATG CTGCTCAGTC TGTTTGA
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Protein sequence | MMIWSLAEIA SKVGGELHGG DTVAEGVSTD TRSLQHGQLF VALTGPTYDG HAFVSDDLPA AGVMVSRLLP TRLPQVLVDD TRLALGRLAR AWRESLPVTV LALTGSNGKT TVKEMLSAIA REHAPTLATR GNLNNDIGVP LTLLEMARNH RYAVVEMGAN HHGEIAYLTS LARPDVALIT NAGPAHLEGF GSIEGVSRAK GEIYSGLGPD GVAVINADDI YADYWYGLNP GRRVISFGLD HVAEVSGEWQ APGSLRLHMN GRVHALELAF PGRHNALNAL AAAAAALGAE IPEEAILRGL ARVHPVSGRL VAVPGRGGAL LLDDSYNANP ASTRAALEVL SGHGGERCMV LGDMGELGDE GETLHAEIGA RARELGIEHF HAVGPLSAHA VRAFGEGAQH HPDQAALIEA LRPMLHAGMT VLVKGSRSAR MERVVQALQA DTNNNHNNGG AAHAAQSV
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