Gene Tgr7_0739 details

Gene Information

• Locus tag: Tgr7_0739
• ID: 7318086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 794600
• End bp: 795058
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643615619
• Product: Mammalian cell entry related domain protein
• Protein accession: YP_002512818
• Protein GI: 220933919
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.942465
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCC GTACCATCGA GATCACCGTG GGCATATTCG TTGCCCTGGG CGTGGCGGCC 
CTGTTCATGC TGGCCATGCA GGTGAGCAAT ATTTCCGAGT ACCGCAACAG TGACGGTTAC 
ACCGTCAGCG CGTACTTCAC CAATATCGGC GGACTCAAGG TGCGTGCCCC GGTGACCGTC 
TCCGGTGTGC GCGTGGGCCG GGTCACGGCC ATCCGCTACG ACCCCGAGCG CTACCAGGCC 
CGGGTGGAAA TCACCATCGG CGCCGATCAT GACTACCTGC CAACCGACAC CCAGGCCAGC 
ATCTACACCG CGGGCCTGCT GGGCGAGCAG TACATCGCCC TGGAACCCGG CGGCGAGGAC 
GAGGTCCTTG CTCAGGGAGG TGAGATCCAT TACACCCAGT CCGCCTTCGT GCTGGAGCAG 
ATCATCGGCC GTATCATGGT CAACATGACC ACCAACTGA 

 

Protein sequence

MTTRTIEITV GIFVALGVAA LFMLAMQVSN ISEYRNSDGY TVSAYFTNIG GLKVRAPVTV 
SGVRVGRVTA IRYDPERYQA RVEITIGADH DYLPTDTQAS IYTAGLLGEQ YIALEPGGED 
EVLAQGGEIH YTQSAFVLEQ IIGRIMVNMT TN