| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0731 |
|---|
| Symbol | |
|---|
| ID | 7318078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 785814 |
|---|
| End bp | 786791 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615611 |
|---|
| Product | Arabinose-5-phosphate isomerase |
|---|
| Protein accession | YP_002512810 |
|---|
| Protein GI | 220933911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC ATCCCGATCA AACCCGTCAG CTTGCCATTG CCGTCCTCGA TACCGAGGCG
CAGGCCATTC TGGATCTCAA GGAACGTATC GACGATCAGT TCATCCGCGC CTGCAAGTTC
CTGCTGGGCT GTACCGGGCG GATCGTGGTC ACGGGCATGG GCAAGTCGGG GCACATCGGC
AGCAAGATCG CCGCCACCCT GGCCAGCACC GGCTCACCGG CGTTTTTTGT TCATCCCGGT
GAGGCCAGCC ACGGCGATCT CGGCATGATC ACCGCCGGCG ACGTGGTGCT GGCCATGTCC
AACTCCGGCG AGACCGACGA ACTGCTCACC ATCCTGCCCA TCATCCGACG CCTGGGCGTG
CCACTGATTG CCATGACCGG CAACAAGGGC TCCACCCTGG CCCGGGAGGC CACGGTGAGC
CTGGATATCA GCGTGGCGAA AGAGGCCTGT CCCCTGGGCC TTGCCCCCAC CTCCAGCACC
ACCGCCACCC TCGCCCTGGG CGATGCCCTG GCCGTGTCCC TGCTGGAGGC CCGGGGCTTT
ACCGCCGATG ACTTCGCCCG CTCTCATCCG GGCGGACGGC TCGGTCGCCG CCTGCTGCTG
CACGTGGCCG ACATCATGCA CACCGGCGAG CGCATCCCCC GGGTGGGCGC CGATGCCCCC
CTGCGCGAAG CCCTGCTGGA GATCACCCGC CAGGGCCTGG GCATGACCGT GGTGGTGGAC
GCCGAGGACC AGGTCATGGG CGTCTACACC GACGGCGATC TGCGCCGAAC CCTGGATAAG
GGTATCGACG TGCACAACAC CACCATCGGC GAGATCATGA CCCGGCAGTT CAAGCAGGCC
CGTCCCGCCA TGCTGGCCGT GGAGGCCCTC AAGCTCATGG AAGACCACAA GATCAGCGCC
CTGCCGGTGA TGGACGATGA GGGCAAACTG ATGGGCGCCC TCAACATGCA CGACCTGCTG
CGCTCGGGCG TGGTTTAA
|
|---|
| Protein sequence | MKLHPDQTRQ LAIAVLDTEA QAILDLKERI DDQFIRACKF LLGCTGRIVV TGMGKSGHIG
SKIAATLAST GSPAFFVHPG EASHGDLGMI TAGDVVLAMS NSGETDELLT ILPIIRRLGV
PLIAMTGNKG STLAREATVS LDISVAKEAC PLGLAPTSST TATLALGDAL AVSLLEARGF
TADDFARSHP GGRLGRRLLL HVADIMHTGE RIPRVGADAP LREALLEITR QGLGMTVVVD
AEDQVMGVYT DGDLRRTLDK GIDVHNTTIG EIMTRQFKQA RPAMLAVEAL KLMEDHKISA
LPVMDDEGKL MGALNMHDLL RSGVV
|
|---|
| |