Gene Tgr7_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0725 
Symbol 
ID7318072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp781328 
End bp781651 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content58% 
IMG OID643615605 
Productsigma 54 modulation protein / SSU ribosomal protein S30P 
Protein accessionYP_002512804 
Protein GI220933905 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCA ATCTCACCGG CCACCACGTG GATCTCACCC CTGCCCTGCG CGACTATGTG 
AACGAAAAGT TCGATCGCCT GGAGCGGCAC TTCGACAATG TCATCGACGT GCACGTGATC
CTTACCGTAG AGAAGCTGCA GCAGAAGGCA GAGGCCACCA TGCTGGTGAG CGGCAACAAC
CTGTTCGCCG ACGCAACCGA TCAGGACATG TATGCCGCCA TCGACGCCCT GGTGGACAAG
CTCGACCGCC AGGTGGTCAA GCACAAGGAA AAGCTCAAGG ATCACCACCG CGCAGAAGGC
TCACACCGCA ACCACAGCGA GTAA
 
Protein sequence
MQINLTGHHV DLTPALRDYV NEKFDRLERH FDNVIDVHVI LTVEKLQQKA EATMLVSGNN 
LFADATDQDM YAAIDALVDK LDRQVVKHKE KLKDHHRAEG SHRNHSE