| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0692 |
|---|
| Symbol | |
|---|
| ID | 7318039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 744923 |
|---|
| End bp | 746098 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615572 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_002512771 |
|---|
| Protein GI | 220933872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGA AAGAGACCTG TGCCATGGAT CAGAGAGTGC AATTTATCGG TGCCTGGCTA
AGCGGGCGCT ATAGCAAGAG TGCGCTATGT CGCCATTTCG GGATCTCGCG TCCCACGGGC
GACAAGTGGA TCAGGCGCCA CGCGCTTGTG GGTGTGGACG GACTCAAGGA GTCCTCCCGT
GCGCCGCACA ACCAGCCCAA CAGGATCAGC GAAGCGCTGT GCGAGCGCAT TGTGCAGGCC
AAGCTTGCGC ATCAGGATTG GGGCCCGAAG AAGGTGCTCG ACTGGCTACG GGCCAGGGAG
CCCGAGGTGG TTTGGCCGGC CGATAGCACG GGCGGGGAGA TCCTGCGCCG TGCCGGGCTG
GTCAAGCCCC GGCGCCGACG CCGGGTTGTG CCGCCCCATG AGGCGCCGTT TGCCGACTGT
GAGCAGTCCA ACGCGGTGTG GGCGGTGGAT TTCAAGGGCG ATTATCGCCT GGGCGAGGGT
AGGCGCTGTT ATCCACTGAC GCTCAGCGAC AGTTTCAGCC GGTATCTGTT GCTGTGTCGG
GGGCTGGCGC GCCCCAGCGG GGCTGCGGTG CATCCCTGGT TTGAATGGGC GTTTCGTGAG
TACGGCCTGC CCCAGGCGAT ACGCAGCGAC AACGGCGCGC CGTTTGCCTC GCGGGCGGTG
GGCGGACTCA GTGCGTTGTC GAAGTGGTGG ATCGATCTGG GGATACACCC GGAGCGTATC
CGCCCCGGGC GGCCCGATCA GAACGGGCGC CACGAGCGCA TGCATCGCAG CCTCAAGGGC
TGGCTCGGGA CGCCGGCCCA GGGCCTTGAG GCCGAGCAGC GGCGCCTGGA GGCCTTTCGG
GCAGAGTACA ACTGGGAGCG CAGTCACGAG GCGCTGAGCA GGCGCACGCC AGGCAGCCTG
TACGCCGCCT CGCCCCGGCC CTATCCGCCG TGCATCGAGC CGCCGGACTA TGATCAAGGG
GTCGAGGTGC GCCGGGTACG AAACAATGGC GAGATCAAGT GGCGCGGGCG GCTGATCTAC
CTCAGTGAGG TGCTGATCGG TGAGCCGGTG GCGCTTGAAC CGGCCGGGGA CGGGCTCTGG
GAGCTACGCT ACCGGTTTCA CCCGCTTGGG CTTTTGAACG AGCAAAACGA CCGGATCACC
CCAGCCAGGG GCTGGCATGG TGATCCCAAG GTGTAA
|
|---|
| Protein sequence | MPWKETCAMD QRVQFIGAWL SGRYSKSALC RHFGISRPTG DKWIRRHALV GVDGLKESSR
APHNQPNRIS EALCERIVQA KLAHQDWGPK KVLDWLRARE PEVVWPADST GGEILRRAGL
VKPRRRRRVV PPHEAPFADC EQSNAVWAVD FKGDYRLGEG RRCYPLTLSD SFSRYLLLCR
GLARPSGAAV HPWFEWAFRE YGLPQAIRSD NGAPFASRAV GGLSALSKWW IDLGIHPERI
RPGRPDQNGR HERMHRSLKG WLGTPAQGLE AEQRRLEAFR AEYNWERSHE ALSRRTPGSL
YAASPRPYPP CIEPPDYDQG VEVRRVRNNG EIKWRGRLIY LSEVLIGEPV ALEPAGDGLW
ELRYRFHPLG LLNEQNDRIT PARGWHGDPK V
|
|---|
| |