| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0677 |
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| Symbol | |
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| ID | 7316552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 728345 |
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| End bp | 730363 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615557 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002512756 |
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| Protein GI | 220933857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0620216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACC ATCGCCTGGC CCTGGCCATC GCCGCCGCCT TGAGCATTCC CTGTGCCCAC
GCGGGCATCA TCCTGGCGCC CATCACGGTG ACCGCCACAA AGGAGGCCGC GATGCCCGCC
ACGGATCAGC TCACCGAGCA CACCCCATTT CAAAGCCCCA AGGCGGACGC GGGCGAGGCG
CTGCGGCTGA TCCCGGGCAT CTCCGGCTCG CGCATGGGCC AACATGGCAT CGACCCGATC
ATCCGCGGGC AGACGGCGGA CCAACTCAAC GTGCTCATCG ACGGCGGTTA CGTATTCGCC
GCCTGCCCCA ACCGCATGGA TCCGCCCACC AGCTTCGGCT CGCTGGTGCT TTACGACCGT
GTGGTGGTGG AGAAGGGCGT ACAGAGCCTG CTGCATGGTC CAGGGGGCAG TGGCGGCACC
ATCCTGTTTG AACGGGACAC CGCCGAGATG GCTGCCGAAC CCGGCGTGCG CGGTCGCCTG
AGCTTCGGCG CCAACGACAA CGGCCTGCAC GGCGAGGCCG GCCTGGACAT GCTGATAAGC
AACGGCCAGG GGTATGTGCG CGTGCTGGGC GAGGCGCTCA ATGCCGGCAA CTATGAAGAC
GGCGACGACA ACGAGGTCCC CTCCTCCATG AAAAAGCGCG CCATCACCCT CATTGGTGGC
TACCGCTTCG ATAGTCACAG CGGTGTGGAA GCCTCGGTGG ATCGCTCCCG GGTCACCGAC
GCCCGTTATG CCGGTGCCGG CATGGACTCC CCCGAGGATG AGCTGACCGC CTACCGGTTT
AAGGGCTGGG CCGAGGCCCT GAACGGACCG GTCAATGGCG TGAAGGCCGA GCTCTGGCGC
AGCGACGTGG ACCATGTCAT GGACAATTTC TCCCTGCGCG AGCCGGCCGA TCCGATGATG
CTCCGGCGTT CCCCCACCAC CTCCCGCACC ACCGGTGGCC GGCTGATCCT GAGCTCGCGT
CTGGACCGCG CCGAGGTGGA CTATGGCGTG GACGTTCGAC GGGTGGACCG CGACGCCGTC
CTGTTGAACG CCCTGAGCGG AGACCTGCTG TTCCGCACCT GGCCGGACGC CCGTCAGGAC
AACGTGGGGG TGTTCACCCA GGCGGACGTG CAGACCGGCG TGTTTGGTTT GCTGCGTGGC
GGACTACGGG TGGATCGCCA TGAATCCAGC ATCGACAGCG ACCTGGAAGG ACAGAGCATC
GCCACTGCCA CCGCCCCATG GGTACCCGAA GGCACGGCAG AGGCGGCCGA CAGGACCCGC
AGGGACACCC AGATGAGCGC CCTGCTGCGC TATGAACATG CGCTCAACGG CTCGCTCACC
GCCTTCACCG GCCTGAGCCG CACCATCCGC CAGCCCGATG CCACCGAGCT CTACTTCTAC
CGTCCGCACA TGACCGAACG GCTGATCGGC AATCCGAGTC TGGATGCCGA GAAACACCAT
CAGCTGGACC TGGGCGTGGT CAGCCAGGGA CCCCGCCTGA GCTACGAGGC CGCTCTTTTC
TATGACCGGG TGGATGACTT CATCCTTCGT GACAATCTGG GCACCACCCT CAGCTTCCGC
AACGTCCGGG CGACGCTCTG GGGTGCGGAA CTGGGGGCAG GTTACCGTCT ACATGACGAC
CTGATTCTGA GCGGCGCTCT GTCCTACGTG CGTGGTCGCA ACGACAGCGA CGGCCGCGAT
CTGCCGCAGA TCCCGCCGCT GAACGGTCAC CTGGGCGTGG AATACCAGCC TGCCCAGTGG
CTCGTGGGCG CCCGTACCCG CTTCGCCGAC AAGCAGACCC ACATTGATAC CCAGGGCGGT
GTGGACACCA TCGAGACCCC TGCCTGGGCC GTGCTGGACC TCTACGGCGC CTACCGGATG
AATCGCCAGG TGGAAGTGCG CGCGGGCGTG GACAACCTGT TCGACCGCCA CTATGCAGAA
CACGTCAACC GCAATTATTC CGCCCTGTTC GGCGACCCCT CGGAGCGCAT CTACGAGCCG
GGCCGCACCC TCTGGGCGCG GGTCAACGTG ACGTTCTGA
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| Protein sequence | MPNHRLALAI AAALSIPCAH AGIILAPITV TATKEAAMPA TDQLTEHTPF QSPKADAGEA
LRLIPGISGS RMGQHGIDPI IRGQTADQLN VLIDGGYVFA ACPNRMDPPT SFGSLVLYDR
VVVEKGVQSL LHGPGGSGGT ILFERDTAEM AAEPGVRGRL SFGANDNGLH GEAGLDMLIS
NGQGYVRVLG EALNAGNYED GDDNEVPSSM KKRAITLIGG YRFDSHSGVE ASVDRSRVTD
ARYAGAGMDS PEDELTAYRF KGWAEALNGP VNGVKAELWR SDVDHVMDNF SLREPADPMM
LRRSPTTSRT TGGRLILSSR LDRAEVDYGV DVRRVDRDAV LLNALSGDLL FRTWPDARQD
NVGVFTQADV QTGVFGLLRG GLRVDRHESS IDSDLEGQSI ATATAPWVPE GTAEAADRTR
RDTQMSALLR YEHALNGSLT AFTGLSRTIR QPDATELYFY RPHMTERLIG NPSLDAEKHH
QLDLGVVSQG PRLSYEAALF YDRVDDFILR DNLGTTLSFR NVRATLWGAE LGAGYRLHDD
LILSGALSYV RGRNDSDGRD LPQIPPLNGH LGVEYQPAQW LVGARTRFAD KQTHIDTQGG
VDTIETPAWA VLDLYGAYRM NRQVEVRAGV DNLFDRHYAE HVNRNYSALF GDPSERIYEP
GRTLWARVNV TF
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