| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0650 |
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| Symbol | metH |
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| ID | 7316064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 682142 |
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| End bp | 685894 |
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| Gene Length | 3753 bp |
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| Protein Length | 1250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615531 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002512730 |
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| Protein GI | 220933831 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACG ATCGCACACG CCTGCTCGAG ACCCATATCA AGGAGCGCAT CCTGATCCTG
GACGGCGCCA TGGGGACCAT GATCCAGGGC TACGGGCTCG GCGAGGCCGA CTACCGGGGC
GAGCGCTTCG CCGACTGGCA GATCGACCTC AAGGGCAACA ACGACCTGCT GGCGCTCACC
CGCCCGGAGA TCATCGCCGA GATCCACGGC CAGTACCTGG AGGCCGGCGC GGACATCCTG
GAGACCAACA CCTTCAACGC CACCACCATC GCCATGGCCG ACTACGCCAT GGAGGAACTG
GTGCCCGAGA TCAACCGGGA GGCGGCGCGC CTGGCCCGGC GGGTGGCCGA TGAATGGACC
GCGAAGACCC CGGACAGGCC CCGCTTCGTG GCCGGGGTGC TGGGCCCCAC CAACCGCACC
GCCAGCATCT CCCCGGACGT GAACGACCCG GGTTTCCGCA ATGTGGACTT CGATCAGCTG
GTGGCCGCCT ACCGGCAGGC CGCCGAGGCG CTCATCGAAG GCGGCGCCGA CCTGCTGCTC
ATCGAGACGG TGTTCGACAC CCTCAATGCC AAGGCGGCGG TGTTCGCCGT GGAGAGCCTG
TTCGACGAGA CCGGCCGGCG CCTGCCGGTG ATGATCTCCG GCACCATCAC CGACGCCTCC
GGGCGCACCC TCTCGGGCCA GACGGCCGAG GCCTTCTGGA ACAGCCTGCG CCATGCGCGG
CCCTTCTCCT TCGGCCTGAA CTGCGCCCTG GGCCCCAGGG AACTGCGTGC CCACGTGGAG
GAGATCTCCC GCATCGCCAA CACCCATGTC TCCGCCCATC CCAATGCGGG CCTGCCCAAC
GAGTTCGGTG GCTACGACCT GAGCCCTGCG GACATGGCGG TGCACATCCG CGAGTGGGCC
GAGAGCGGCT TTCTCAACAT CGTCGGCGGC TGCTGCGGCA CCACACCGGC CCACATCCGT
GCCATCGCCG AGGCGGTGGC GGATCTCCCG CCGCGCAGCA TCCCCAAACG GGAACCGGCC
TGCCGCCTGT CGGGGCTCGA GCCCTGCAAC ATCACCGAGG ACTCCCTGTT CGTCAACGTG
GGCGAGCGCA CCAACGTCAC CGGCAGCGCG CGCTTCAAGC GCCTGATCAA GGACGGCGAC
TATGAGACCG CCCTGGAGGT GGCCGCCAGC CAGGTGGAGA ACGGCGCCCA GATCATCGAC
GTGAACATGG ACGAGGGTAT GCTGGATTCG AAGGCCGCCA TGGTGCGCTT CCTGAACCTC
ATGGCCGCCG AGCCGGACAT CTCCCGGGTG CCGGTGATGA TCGACTCCTC CAAGTGGGAG
GTGATCGAGG CGGGTCTGAA GTGCATCCAG GGCAAGGGCG TGGTGAACTC CATCTCGCTG
AAGGAAGGCG AGGCCACCTT CATCGAGCAC GCCAAGCTGG TGCGCCGCTA CGGCGCCGCG
GTGATCGTCA TGGCCTTCGA CGAGCAGGGC CAGGCGGACA CCCAGGCGCG CAAGGTGGAG
ATCTGCGAGC GCGCCTACCG CATCCTCACC GAGCAGGTGT GCTTCCCGGC GGAAGACATC
ATCTTCGACC CCAACATCTT CGCCATCGCC ACGGGTATCG AGGAACACAA CAATTACGGT
GTGGACTTCA TCGAGGCCAC CCGCGAGATC AAGAAGCGTC TGCCCCATGC CCTGGTCTCC
GGGGGCGTGT CCAACGTGTC CTTCTCCTTC CGCGGCAACG AGCCGGTGCG CGAGGCCATC
CACGCGGTGT TCCTGTACCA CGCCATCCAC GCGGGTATGG ACATGGGCAT CGTCAACGCC
GGGCAGCTGG CGGTCTACGA CGAGATCGAC AGGGAACTGC GCGAACTGGT GGAGGACGTG
GTGCTCAACC GCCGCCCGGA TGCCACCGAG CGCCTGCTGG AGGCTGCCGA GCGCTATCGC
GGCGAGGGCG GCGAGGCCAA GAAGGAAGAC CTGGAGTGGC GCAAGCTGCC GGTGGCCAAG
CGTCTGGAGC ATGCCCTGGT GAAGGGCATC GACGCCTTCG TGGTGGAGGA CACCGAGGAG
GCCCGCCAGG GCGTGGATCA CCCCATCCAC GTGATCGAAG GCCCGCTCAT GGACGGCATG
AACGTGGTGG GCGACCTGTT CGGCGACGGC AAGATGTTCC TGCCCCAGGT GGTGAAGTCC
GCGCGGGTCA TGAAGAAGGC GGTGGCCCAC CTGATCCCGT TCATCGAGGC GCTCAAGCAG
GAGGGCGACC GGCCCAACGG CAAGGTGCTC ATGGCCACCG TGAAGGGCGA CGTGCACGAC
ATCGGCAAGA ACATCGTGGG CGTGGTGCTC CAGTGCAACA ACTTCGAGGT CATCGATCTC
GGCGTGATGG TGCCCGCCCA GAAGATCCTG GACACCGCCG TGGAGCAGGA CGTGGACGTG
ATCGGTCTCT CCGGCCTGAT CACGCCGTCC CTGGAGGAGA TGGCCCACAT GGCCAAGGAG
ATGCAGCGCC TGGGCATGAA GCTGCCGCTG CTGATCGGCG GCGCCACCAC CTCCCGTGCC
CACACGGCGG TGAAGATCGA GCCCCACTAC GAAGGCCCCA CGGTGTGGGT GAAGGATGCC
TCCCGCGCCG TGGGCGTGGT GCAGAGCCTG ATCAGCCAGA ACACCCGGGA AGAGTACGTG
GCGAAGATCC GCGCCGAGTA CGAGGAGGTG CGCCGCCACC ATGCCGAACG GCAGAAGGAG
CAGAAGTGGC TGACCCTGGC CCAGGCCCGG GACAACCGCA CCCCGATCGA CTGGCAGGGC
TACCAGCCGC CCCGCCCCAG GGCCCTGGAG GCGGAGCCGG CCGGGCCGGG CATCACCGTG
CTGCACCCCT TCGGGCCTGA CAGCGTGGTG ATCCGCTTCG ACGACTATCC CCTCGAGGAT
CTGCTCGACT ACATCGACTG GACGCCCTTT TTCCATGCCT GGCAGCTGCA TGCCGCCTAC
CCGCGCATCT TCGACGACGA GGTGGTGGGC GAGGAGGCGA AGAAGCTGTT CGCCGACGCC
CGGGTGATGC TGGAGACGAT CATCAGGGAG GGCTGGCTCA AGGCCCGCGG CGTGATCGGC
TTCTTTCCCG CCAACAGCGT GGATGCCGAC GACATTGAAC TCTACCGGGA CGAGGACCGC
ACCGCGCCGC TGATGCGCCT GCACCACCTG CGCCAGCAGA CCGAGCGTCG CGGCAAGGGG
CCGAACCAGT GCCTGGCGGA TTTCATTGCC CCCCGTGAGA CCGGGCTGCC CGACTACCTG
GGTGGATTCG CAGTCACCGC CGGCATCGGT ATCGACGAGC ACGTGAGGCG TTTCGAGCAG
GCCCATGACG ACTACCACGC CATCATGCTC AAGGCGCTGG CCGACCGCCT GGCCGAGGCG
CTGGCCGAGC GCATGCACGA GCGGGTGCGA CGGGAGTTCT GGGGCTATGC CAGTGACGAA
CGCCTGGACA ACGAGGCGCT CATCAAGGAG CAGTACCGGG GCATCCGGCC CGCCCCCGGC
TATCCCGCCT GCCCGGAGCA CACCGAGAAG GGCCTGCTCT GGGAGCTGCT CAAGCCCGAG
GAGAATGCCG GCATGAGCAT CACCGAGAGC TACGCCATGC TGCCCACCGC CGCCGTCTCC
GGCTGGTACT TCGCCCATCC CGAGGCCAGG TACTTCAACG TGGGCAAGAT CAACCGGGAC
CAGGTGGCCG ACTACGCCCG GCGCAAGGGG ATGAAGCCCG CCGAGGCGGA GCGCTGGCTG
GCGCCCAACC TGGGGTACGA GCCGGAGGAT TGA
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| Protein sequence | MTDDRTRLLE THIKERILIL DGAMGTMIQG YGLGEADYRG ERFADWQIDL KGNNDLLALT
RPEIIAEIHG QYLEAGADIL ETNTFNATTI AMADYAMEEL VPEINREAAR LARRVADEWT
AKTPDRPRFV AGVLGPTNRT ASISPDVNDP GFRNVDFDQL VAAYRQAAEA LIEGGADLLL
IETVFDTLNA KAAVFAVESL FDETGRRLPV MISGTITDAS GRTLSGQTAE AFWNSLRHAR
PFSFGLNCAL GPRELRAHVE EISRIANTHV SAHPNAGLPN EFGGYDLSPA DMAVHIREWA
ESGFLNIVGG CCGTTPAHIR AIAEAVADLP PRSIPKREPA CRLSGLEPCN ITEDSLFVNV
GERTNVTGSA RFKRLIKDGD YETALEVAAS QVENGAQIID VNMDEGMLDS KAAMVRFLNL
MAAEPDISRV PVMIDSSKWE VIEAGLKCIQ GKGVVNSISL KEGEATFIEH AKLVRRYGAA
VIVMAFDEQG QADTQARKVE ICERAYRILT EQVCFPAEDI IFDPNIFAIA TGIEEHNNYG
VDFIEATREI KKRLPHALVS GGVSNVSFSF RGNEPVREAI HAVFLYHAIH AGMDMGIVNA
GQLAVYDEID RELRELVEDV VLNRRPDATE RLLEAAERYR GEGGEAKKED LEWRKLPVAK
RLEHALVKGI DAFVVEDTEE ARQGVDHPIH VIEGPLMDGM NVVGDLFGDG KMFLPQVVKS
ARVMKKAVAH LIPFIEALKQ EGDRPNGKVL MATVKGDVHD IGKNIVGVVL QCNNFEVIDL
GVMVPAQKIL DTAVEQDVDV IGLSGLITPS LEEMAHMAKE MQRLGMKLPL LIGGATTSRA
HTAVKIEPHY EGPTVWVKDA SRAVGVVQSL ISQNTREEYV AKIRAEYEEV RRHHAERQKE
QKWLTLAQAR DNRTPIDWQG YQPPRPRALE AEPAGPGITV LHPFGPDSVV IRFDDYPLED
LLDYIDWTPF FHAWQLHAAY PRIFDDEVVG EEAKKLFADA RVMLETIIRE GWLKARGVIG
FFPANSVDAD DIELYRDEDR TAPLMRLHHL RQQTERRGKG PNQCLADFIA PRETGLPDYL
GGFAVTAGIG IDEHVRRFEQ AHDDYHAIML KALADRLAEA LAERMHERVR REFWGYASDE
RLDNEALIKE QYRGIRPAPG YPACPEHTEK GLLWELLKPE ENAGMSITES YAMLPTAAVS
GWYFAHPEAR YFNVGKINRD QVADYARRKG MKPAEAERWL APNLGYEPED
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