| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0615 |
|---|
| Symbol | |
|---|
| ID | 7316029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 648795 |
|---|
| End bp | 650042 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643615498 |
|---|
| Product | Glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_002512697 |
|---|
| Protein GI | 220933798 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACC GCGAACAATA CCGACTGGAT CGCATTGACC CTGAAATATT CAACGCCATT
CAAAACGAAA ACCGGCGTCA GGAAGAGCAT ATTGAACTGA TCGCATCGGA AAACTACACC
TCACCGGCCG TCATGGCGGC GCAGGGATCC CAGCTCACCA ATAAATACGC CGAAGGTTAT
CCCGGCAAGC GCTATTACGG CGGCTGCGAA CATGTGGATG TGGTGGAACA ACTGGCCATC
GACCGAGTGA AGGCGCTGTT TGGCGCCGAA GCCGCAAACG TGCAACCGAA CTCCGGCTCC
CAGGCCAACC AAGGCGTATT CTTCGCCATA TTGCAACCGG GCGACACCAT TATGGGCATG
AACCTGGCCG AAGGCGGTCA CCTCACCCAT GGCATGGCGC TGAACATGAG CGGCAAATGG
TTCAATGTGG TGAGCTACGG CCTGAACGCC GAAGAAGACA TCGATTACGA AGCCCTGGAG
CGCAAGACTC GCGCGAGCAA ACCGAAACTC ATCATCGCCG GTGCCTCGGC CTTCGCGCTG
TGCATCGACT TCGAGCGCAT CGCGCGCGTG GCGAAGGAAG TGGGCGCGTA TTTCATGGTG
GACATGGCGC ACTATGCAGG CCTGATCGCC GCCAGGGTTT ACCCTAACCC TGTGCCTCAT
GCCGACTTCG TCACCACCAC TACACACAAA AGCCTGCGCG GCCCGCGCGG TGGTGTGATC
CTGATGAAGG CCGAATACGA GAAGGCGATC AACTCGGCTA TATTCCCCGG CATCCAGGGC
GGTCCGCTGA TGCACGTGAT TGCCGCCAAG GCGGTCGCAT TCAATGAAGC CATGACACCC
GAGTTCCGGG CCTACCAGCA ACAAGTCATA AAGAACGCAG CGGTGCTGGC GGACACCTTG
ATCGCGCGTG GCCTGCGCAT CGTCTCCGGC CGCACCGAAA GCCATGTGAT GCTCGTTGAC
CTGCGCGCCA AGCAGATCAC CGGCAAGGAA GCCGAGCGTG TCCTCGGCGA GGCCCACATC
ACGGTCAATA AAAACGCCAT CCCCAACGAC CCCGAGAAGC CGTTCGTTAC CTCGGGCATT
CGCCTCGGTT CTCCCGCCAT GACCACGCGC GGTTTCCGCG AGGACGAAGC GCGTCAGGTC
GGGCACCTAA TCGCCGATGT TCTTGACTCA CCTCAGGAGC CCGGGCGCAT TGTCCAGGTT
CGCGAACACG TCGCGACGCT GACACAGGCG TTTCCAGTCT ATCGCTGA
|
|---|
| Protein sequence | MFDREQYRLD RIDPEIFNAI QNENRRQEEH IELIASENYT SPAVMAAQGS QLTNKYAEGY
PGKRYYGGCE HVDVVEQLAI DRVKALFGAE AANVQPNSGS QANQGVFFAI LQPGDTIMGM
NLAEGGHLTH GMALNMSGKW FNVVSYGLNA EEDIDYEALE RKTRASKPKL IIAGASAFAL
CIDFERIARV AKEVGAYFMV DMAHYAGLIA ARVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEYEKAI NSAIFPGIQG GPLMHVIAAK AVAFNEAMTP EFRAYQQQVI KNAAVLADTL
IARGLRIVSG RTESHVMLVD LRAKQITGKE AERVLGEAHI TVNKNAIPND PEKPFVTSGI
RLGSPAMTTR GFREDEARQV GHLIADVLDS PQEPGRIVQV REHVATLTQA FPVYR
|
|---|
| |