Gene Tgr7_0607 details

Gene Information

• Locus tag: Tgr7_0607
• ID: 7317955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 640195
• End bp: 642204
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643615491
• Product: site-specific recombinase
• Protein accession: YP_002512690
• Protein GI: 220933791
• COG category: [L] Replication, recombination and repair
• COG ID: [COG4389] Site-specific recombinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.248138
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAA CCAGCGCCGA AGCCCTGCTG AGCCGGCTTG AATCACACCA GGACCTGGAC 
CTCGCCGACA CCCTGCGCCT GATCATGGAC TGGCTGCGCC CCGAGGACGT GTCCCGCGGC 
GTCGCCGCGG TGGTGAACCG CATCGAACAG CTGGGCATCG CCCTGGACGA TCACCCGGCG 
CTGCGTGAAC GCCTGCGCGA ACGCATGGCC AGTGAACTGG AGACCGCGCG GCACCTCACC 
CTGTACACCG AGATCGGCCT GTTCTCCCGC CGTGGTTTCC TGCGCGAGTT CGCCGAACGC 
CTCTACGAGC GTCTCAATCC CCGTCCTCTC GATCACAGCA ATCTCAAGGA CGTGCTGGCC 
CACGTGTTCC ACGATCCCAA GGACGCCCAG TGGGTGGCGG CGCTGCCCAA CGATGCCTGG 
TGGCGCCTGC TGGAAGGCCT GGGCTGCCTG TCCAGTGAAT CCGGACGCAT CACCCGGCGG 
GCGCGGGAGG AAGTGCTCTA CGCCCTGGAA ATGCTGGCCG TGTGGGTGGC CGCCGAGGAA 
CTGGAGCCCG AGTTCCTGCG CCTGGACCCG TCCATCGCCA AGCGCCACTC CGCCTTCGTC 
GCCCTGCAGC GGGAGCTTGC CGGCTACGTG GAGGCCTACC GGGCATGGCT GTCCGGGGAC 
ATCGAGGCGT TTGACGACGA CAAGCACGTG CACGTGCTCA TCGAGCAGTG CCGTGAGCAG 
CTCGCCACCT TCCACAAGCG CGCCGTGACC CGGGGCAGCA GCATCTCGCT CACCCATCTG 
CTCGAACGCC TGAACCAGAC CCTGACACGC ATCACCACCC TGCTGGACGT CCTCGACCCC 
TCCGACACCA CCGCGCGGCG CCGGGCCGCT GCCGGCCTGT TCCGCGAACT GGTGATCCGT 
AACGCGCGAC GCAACAGCCT GCGCGCCCTG TGGCAGGAGA ACATCAAGCT GCTGTCGCGC 
AGCGTCACCC AGCAGGCCAG CGAGACCGGC GAGCACTACA TCACCACCGA CCGCGCCGAA 
TACCTGGGGA TGCTGAAAAG CGGCGCGGGC GCGGGCCTGA TCATCGCCTT CATGGCACTC 
ATCAAGATCC ACATCGAGGC CCTGGGACTG TCGGCGGGGT GGAACACCCT GTGGGTGAGT 
CTCAACTACG GACTCGGCTT CGTGCTCATC CACATCCTGC ACTTCACCGT GGCCACCAAG 
CAGCCGGCCA TGACCGCCGC GCGCCTGGCC GCCGCCATCG AGGAAACGGA AAAGGGCACC 
GCCAGCCCCG GCAAACTGGC GGACCTGCTC ATCCAGGTGG GACGCTCCCA GTTCGCGGCG 
GTGCTGGGCA ATGTGGGCGT GGCCCTACCC ATGGCCATCC TGGTGGGCTG GCTGTACGCG 
CAGCTGCTGG GCCTGCCGGT GCTGAGCCCC GAAAAGGCCG GCTACCAGCT GGACAAACTC 
TCGCCCATCT CGGGGCTCGC CCTGTTCCAC GCCGCCATTG CCGGCGTGTG GCTGTTCGTG 
GCGGGACTGA TCTCGGGCTT CTTCGACAAC CGCAGCGCCT ACCTGAACCT GCCCGGCCGC 
CTGCACGCCC ATCCTCTGCT CGGCCGCATC CTGCCGGAGC GGACCCGGGC ACGCTTCGCC 
GACTACATCG GCCACAACTA CGGCGCCCTG GCGGGCAACT TCTTCTTCGG CGTGCTGCTC 
GGCACCACCG GCTATCTGGG CTACCTGCTG TCCCTGCCCC TGGACATTCA GCACGTGGCC 
TTCGGCTCTG CCAACCTGGG CTACGTGGCC GCCACCCGAC TGGACGCCCT ACTGGCATTG 
CTGCCCTATT TCGTGTTTGT CTTGCTCATC GGCGCCGTGA ACCTGTGGGT GAGTTTCTCC 
CTGGCCCTGT ACATCGCGTT GCGGGCCCGG GGCACGCGCA TCGGCGCCCT TGACCGGCTG 
ATCAAGGCCT ACCTGAGGCG CATCGGTGAA CGGCCCAGGG AGTTCCTGCT GCCGCCAGCC 
AGGCAACAGG CCCAGCAAGA CAAACCCTAA 

 

Protein sequence

MSETSAEALL SRLESHQDLD LADTLRLIMD WLRPEDVSRG VAAVVNRIEQ LGIALDDHPA 
LRERLRERMA SELETARHLT LYTEIGLFSR RGFLREFAER LYERLNPRPL DHSNLKDVLA 
HVFHDPKDAQ WVAALPNDAW WRLLEGLGCL SSESGRITRR AREEVLYALE MLAVWVAAEE 
LEPEFLRLDP SIAKRHSAFV ALQRELAGYV EAYRAWLSGD IEAFDDDKHV HVLIEQCREQ 
LATFHKRAVT RGSSISLTHL LERLNQTLTR ITTLLDVLDP SDTTARRRAA AGLFRELVIR 
NARRNSLRAL WQENIKLLSR SVTQQASETG EHYITTDRAE YLGMLKSGAG AGLIIAFMAL 
IKIHIEALGL SAGWNTLWVS LNYGLGFVLI HILHFTVATK QPAMTAARLA AAIEETEKGT 
ASPGKLADLL IQVGRSQFAA VLGNVGVALP MAILVGWLYA QLLGLPVLSP EKAGYQLDKL 
SPISGLALFH AAIAGVWLFV AGLISGFFDN RSAYLNLPGR LHAHPLLGRI LPERTRARFA 
DYIGHNYGAL AGNFFFGVLL GTTGYLGYLL SLPLDIQHVA FGSANLGYVA ATRLDALLAL 
LPYFVFVLLI GAVNLWVSFS LALYIALRAR GTRIGALDRL IKAYLRRIGE RPREFLLPPA 
RQQAQQDKP