Gene Tgr7_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0539 
Symbol 
ID7317887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp569823 
End bp570491 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID643615424 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002512623 
Protein GI220933724 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.977509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCT ACGCCAACAT CGTCCAGTTC TTCCAGCAGG GCGGGGTCTT CATGTACCCC 
ATCGTGGTGG TGCTGGCGCT GGGCCTGGCC ATCGCCATCG AGCGCTACGT GTATCTGAGC 
GTGTTCAGCC TGCGCAACCA GCGCACCTGG CAGCAGCTCC TGCCGCTGCT GCAGACCGGC 
AAGCTGCGCG AGGCCCAGGC CTACACCGAG CAGTCCAAGG CCGCGATCAG CCGCATCCTG 
AACTACGGTC TCAGCCGTCT CGGCATCGCC CGGCGCACCA GTGACCTGGA GATGGCCATG 
GAGGAAGGGC TGATGGAGGT GGTGCCGCGC ATCGAGAAAC GCACCCACTA CCTGGCCACC 
CTGGCCAACA TCGCCACCCT GCTCGGCCTG CTCGGCACCA TCATCGGACT GATCGAGGCC 
TTCACCGCCG TGGCCAGCGC CAATCCCGCC GAGAAGGCCG ACATGCTCTC CGCCAGTATC 
TCGGTGGCCA TGAACACCAC CGCCTTCGGC CTGATGGTGG GCATCCCACT GCTGATGATC 
CACGCGGTGC TTCAGACCAA GAGCACCCAG ATCATCGACA GCCTGGAGAT GGCCTCGGTG 
AAGGTCATGA ACATCATCGG CGACCGTGCC AACCGGCAGG CCGCCACGGC GACGGCGAGT 
GCGTCATGA
 
Protein sequence
MNIYANIVQF FQQGGVFMYP IVVVLALGLA IAIERYVYLS VFSLRNQRTW QQLLPLLQTG 
KLREAQAYTE QSKAAISRIL NYGLSRLGIA RRTSDLEMAM EEGLMEVVPR IEKRTHYLAT 
LANIATLLGL LGTIIGLIEA FTAVASANPA EKADMLSASI SVAMNTTAFG LMVGIPLLMI 
HAVLQTKSTQ IIDSLEMASV KVMNIIGDRA NRQAATATAS AS