Gene Tgr7_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0525 
Symbol 
ID7317709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp556802 
End bp557497 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID643615408 
Productouter membrane lipoprotein LolB 
Protein accessionYP_002512609 
Protein GI220933710 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCCC TGATTCCCCT CGGCCGGAGC CGGACCGGGG CTTTGTGCAG CGCGGGGTCC 
CGGCGCGCAT GGCCCCGAGG TACATGGTTA CGGGCCGCGC TGCTGCTCAC CTTTCTGCTG
CTCGCCGGCT GTGCCGTGCG TCCCCCGGTG CTGGAGGAAG CCGCGCCCGA GGCCTGGGAC
GCGCACCAGG CCGCCGTGCA GGCCCTGGAG CAGTGGTCCC TGAGCGGGCG CATCGCCCTG
GATGCCGACG GTCAGCAGTG GCACGCCAAC GTGCGCTGGA AGGAACGCAA CGGGGACTAT
GACATCCAGT TTTTCGGCCC CTTCGGAAGG GATGCCGGCC GTCTGCGCGG CGACGAGACG
GGCGTGAACC TGCGTACCCC TGACGGCGAG TACTACAACG CCCCGGACCC GGACCGGCTG
GTGCGCGACG TGCTGGGCTA CCGGCTTCCG GTGAGCGGAC TGCGCCACTG GGTGCTGGGC
CTGCCCGCGC CCGGGTCGGG CAGCGAGCGC AGTTTCGATG CCCGTGGCCG GCTCAGCCTG
CTGGAGCAGT CCGGCTGGCA GGTGCAGTAC CAACGCTACC GGGAGTCGGT CTCCCCGACC
CTGCCGGATC GCCTGGAACT GCATTACGGT CAGGAGATCC GCCTGCGCCT GCTGGTGGAC
ACCTGGGCCC TGGAGCCCGT GAGCGCCGCC CAGTGA
 
Protein sequence
MNALIPLGRS RTGALCSAGS RRAWPRGTWL RAALLLTFLL LAGCAVRPPV LEEAAPEAWD 
AHQAAVQALE QWSLSGRIAL DADGQQWHAN VRWKERNGDY DIQFFGPFGR DAGRLRGDET
GVNLRTPDGE YYNAPDPDRL VRDVLGYRLP VSGLRHWVLG LPAPGSGSER SFDARGRLSL
LEQSGWQVQY QRYRESVSPT LPDRLELHYG QEIRLRLLVD TWALEPVSAA Q