| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0524 |
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| Symbol | |
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| ID | 7317708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 555081 |
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| End bp | 556805 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643615407 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002512608 |
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| Protein GI | 220933709 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATC TGCTTGTTCT GCTTCTCCTG ACCGCACTGC TGGGTGCCTG CGCCCAGCAG
GCACCCCGGC CCAACGGCAC CCTGCAGCCC CTGCAGGGTG CGGAATTGCG GGTTCAGGAG
CAGCCCGAGG ATGACAACGC CCGCGGCGAA CTGCTGTATC TGCTGCTGGT GGGTGAACTG
GCGGGCCAGA TGGGGGCGCT GGATCTCTCC GTCAGCCATT ACCTGATGGC TGCGCTCAAC
AGCCAGGATC CCGCGGTCTC GGAACGGGCC ACCCGCATCG CCCTGTTCGC CGATCAGCGC
GAGGCCGCGC TGCGGGCCTC CATGCGCTGG GTGGAGCTGG CGCCGGCGAG CGTCGAGGGC
CGTCAGGTGC TGGGGGCCCT GCTGGTCAAC GCGGGCCGGG TGCCCGAGGC CGTGGAGCAG
CTGGACTGGG TGATCCAGAA CAGTCCCCAG GGCCAGGCTG CGGGCCATAC CACCGTGTCC
AACCTGCTGT CCCGTTCCCA GAACCAGGCG GCGGCCCTGG CGGCGATGGG GCAGCTGGCC
GAACGCTATC CCGGTGATGC CAGCATGCAG CTGGCCCAGG CGCGGCTGGC GCTGCAGATG
CGCCAGCCGG AACAGGCCCT GGAGGCCGCC GACCGGGCTC TGACCCTGGA TCCGGGCCTC
TCCGATGCCA AGGTGCTGCG CGCCCGCGCC TACACCCAGA TGGGGGACCT GGGCCGGGGT
GTGCAGATCA TGCGCGAGGC GGTCGCGTCC GATCCGCAGA ACACGGATCT GCGCCTGGCC
TATGGCCGTC TGCTGATCCA GGCCGGGGAC TACGACGAGG CCCGCGCCGA ATTCGAGCAG
CTCATCGCGC GCCGCCCCGG AGACGGTGAC CTGCTCTACA CCCTGGGCCT GCTCAGTCTC
GAGATGGAGC GCTACGAGGA TGCCCAGTCC TACTTCACGC GCCTGCTGGG CATGGGACAC
CGGTCCAACG ATGCCAACTA CTACCTGGGA CGCATCGCCG AGACCGAACG CCGCAGCGAC
GACGCCCTGC GCCACTACCG CGGCGTGGGT GACGGTGACC ATTTCCGCGA CGCCCGGGTG
CGTCTGGCCC TGCTCATGGG CCGGGCCGGG CAGGTGGATG CGGCCCTGGA CATGCTGCGC
GAGATGCGCC GGGATGCCGA CGAGCCCGAC TGGCGGGTGC GCCTGTATTT GACCGAGTCC
CAGGTGCTGC GCGACGCGCG GGAATACCAG GCGGCCATGG AGGTCCTGGA CCAGGGTCTG
CTGGAGCAGC CGGATTCCGG CGAACTGCTC TACGCTCGGG CCCTGGTGGC CGAGAAGCTC
GATCGCCTGG ACATCCTGGA GACCGACCTG CGTGCCATCC TGGCCAGGGA TCCGGACAAT
GCCGCCGCCC TCAACGCCCT GGGTTACACC CTGGCGGACC GCACCGACCG CCTGGACGAG
GCCTACGACT ACATCCGCCG TGCCCACGCC CAGCATCCGG AGGACGCCGC CATCCTGGAC
AGCCTGGGCT GGGTGCTCTA CCGCATGGGA CGCCTGGACG AGGCGGAGAC CTACCTGCGC
CAGGCCTACG ACACCATGTA CGACCCGGAG ATCGCCAGCA ACCTGGCCAT GCTGCTCTGG
GACCGGGGCC AGCGGGACGA GGCCCGCCGC GTGCTCGAGG ACGCCCTGGC CCAGGACCCG
GACCATGACC GTCTGCTGCG CGTGAAGGAT CGCTTCGAAC AGTGA
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| Protein sequence | MRNLLVLLLL TALLGACAQQ APRPNGTLQP LQGAELRVQE QPEDDNARGE LLYLLLVGEL
AGQMGALDLS VSHYLMAALN SQDPAVSERA TRIALFADQR EAALRASMRW VELAPASVEG
RQVLGALLVN AGRVPEAVEQ LDWVIQNSPQ GQAAGHTTVS NLLSRSQNQA AALAAMGQLA
ERYPGDASMQ LAQARLALQM RQPEQALEAA DRALTLDPGL SDAKVLRARA YTQMGDLGRG
VQIMREAVAS DPQNTDLRLA YGRLLIQAGD YDEARAEFEQ LIARRPGDGD LLYTLGLLSL
EMERYEDAQS YFTRLLGMGH RSNDANYYLG RIAETERRSD DALRHYRGVG DGDHFRDARV
RLALLMGRAG QVDAALDMLR EMRRDADEPD WRVRLYLTES QVLRDAREYQ AAMEVLDQGL
LEQPDSGELL YARALVAEKL DRLDILETDL RAILARDPDN AAALNALGYT LADRTDRLDE
AYDYIRRAHA QHPEDAAILD SLGWVLYRMG RLDEAETYLR QAYDTMYDPE IASNLAMLLW
DRGQRDEARR VLEDALAQDP DHDRLLRVKD RFEQ
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