Gene Tgr7_0487 details

Gene Information

• Locus tag: Tgr7_0487
• ID: 7317671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 518549
• End bp: 520438
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643615370
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_002512571
• Protein GI: 220933672
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.200164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCA TCCCCCAGGA CTTCATCGCC AAGACCGCCC GGCTCTCCGA GGAGATCACC 
CGGCCGTTCC CCAATTCCCG CAAGATCTTC GTGCAGGGTT CGAGCCCGGA CATTCGCGTG 
CCCATGCGGG AGGTGAGCCA GGCGCCCACC CAGGCCTCCA TGGGGGCGGA GGAGAACCCG 
CCCATCACCG TCTACGACAC CTCCGGCCCC TACACGGACC CGGCCGCGTC CATCGACCTG 
ATGCAGGGTC TGCCGGCGCT GCGCGAGGCC TGGATCGAGT CGCGCCAGGA CACCGAGCGC 
CTGGACGGGC CCAGCTCCGA GTACGGCCGC GCCCGGGCCG CCGACCCGCA GCTGGCCGCG 
CTGCGCTTCG AGCACATCCG TGCGCCGCGC CGGGCGCGCC CTGGCCTGAA CGTCACCCAG 
ATGCACTACG CCCGCCGGGG CATCATCACT CCCGAGATGG AGTTCGTCGC CATTCGCGAG 
AACGCCCGCC TGGAGGAGAT GCGCGCCGAT CCCCGCTACG CCAAGCTGCT GCGCCAGCAC 
GCCGGCCAGC CCCTCGGCGC GAAGATCCCG GAGCTGATCA CGCCCGAGTT CGTGCGTGAC 
GAGGTGGCCG CGGGCCGGGC CATCATCCCC AGCAACATCA ACCACCCGGA ACTGGAGCCC 
ATGATCATCG GGCGCAATTT CCGGGTGAAG ATCAATACCA ACATCGGCAA CTCCGCGGTC 
ACCTCCAGCA TCGAGGAGGA GGTGGAGAAG CTGGTGTGGT CCTGCCGCTG GGGCGGCGAC 
ACCCTCATGG ACCTGTCCAC GGGCAAGAAC ATCCACGAGA CCCGTGAATG GATCCTGCGC 
AACAGCCCCG TGCCCATCGG CACCGTGCCC ATCTACCAGG CCCTGGAGAA GGTCAACGGC 
AAGCCCGAGG AGCTGACCTG GGAGCTGTTC CGGGACACCC TGATCGAGCA GGCGGAGCAG 
GGGGTGGACT ACTTCACCAT CCACGCCGGC GTGCTGCTGC GCTACGTGCC GCTCACCGCC 
GACCGGGTCA CGGGCATCGT CTCCCGGGGC GGCTCCATCA TGGCCAAGTG GTGCCTGGCC 
CATCACCGCG AGAACTTCCT CTACACCCAC TTCGAGGAGA TCTGCGAGAT CATGAAGGCC 
TACGACGTGG CCTTCAGCCT GGGCGACGGC CTGCGCCCAG GCTGTCTCGC GGATGCCAAC 
GACGCCGCCC AGTTCGGCGA ACTGGAGACC CTGGGTGAGC TGACCAAGAT CGCCTGGGAG 
CATGACGTGC AGGTGATGAT CGAGGGCCCG GGCCACGTGC CCCTGCACAT GGTCAAAGAG 
AACGTGGACA AGGAGCTCAG CGACTGCTTC GAGGCGCCCT TCTACACCCT GGGCCCCCTG 
GTCACGGACA TCGCGCCGGC CTACGACCAC ATCACCTCCG GCATCGGTGC CGCCAACATC 
GGCTGGTACG GCACCGCCAT GCTCTGCTAC GTGACCCCCA AGGAGCACCT GGGCTTGCCC 
AACAAGCAGG ACGTGCGCGA CGGCATCATC ACCTACAAGA TCGCCGCCCA TGCCGCCGAT 
CTCGCCAAGG GCTTCCCCGG CGCTCAGGTG CAGGACAATG CGCTTTCCAA GGCCCGCTTC 
GAGTTCCGCT GGGAGGACCA GTTCAACCTG GCCCTGGACC CGGAGCGGGC CCGGGAATTC 
CACGACGAGA CCCTGCCCAA GGAGGCCCAC AAGGTGGCGC ACTTCTGCTC CATGTGCGGG 
CCCAACTTCT GCTCCATGAA GATCACCCAG GACGTGCGTG ATTATGCCGT CAAGCAGGGC 
ATCTCCGAGC AGGAGGCCCT GGAGAAGGGC ATGCAGGAGA AGGCGGTGGA GTTCGTGAAC 
AAGGGCGCGC AGATCTACCG GGAGGTTTGA 

 

Protein sequence

MSAIPQDFIA KTARLSEEIT RPFPNSRKIF VQGSSPDIRV PMREVSQAPT QASMGAEENP 
PITVYDTSGP YTDPAASIDL MQGLPALREA WIESRQDTER LDGPSSEYGR ARAADPQLAA 
LRFEHIRAPR RARPGLNVTQ MHYARRGIIT PEMEFVAIRE NARLEEMRAD PRYAKLLRQH 
AGQPLGAKIP ELITPEFVRD EVAAGRAIIP SNINHPELEP MIIGRNFRVK INTNIGNSAV 
TSSIEEEVEK LVWSCRWGGD TLMDLSTGKN IHETREWILR NSPVPIGTVP IYQALEKVNG 
KPEELTWELF RDTLIEQAEQ GVDYFTIHAG VLLRYVPLTA DRVTGIVSRG GSIMAKWCLA 
HHRENFLYTH FEEICEIMKA YDVAFSLGDG LRPGCLADAN DAAQFGELET LGELTKIAWE 
HDVQVMIEGP GHVPLHMVKE NVDKELSDCF EAPFYTLGPL VTDIAPAYDH ITSGIGAANI 
GWYGTAMLCY VTPKEHLGLP NKQDVRDGII TYKIAAHAAD LAKGFPGAQV QDNALSKARF 
EFRWEDQFNL ALDPERAREF HDETLPKEAH KVAHFCSMCG PNFCSMKITQ DVRDYAVKQG 
ISEQEALEKG MQEKAVEFVN KGAQIYREV