Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0483 |
Symbol | |
ID | 7317667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 514095 |
End bp | 515417 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615366 |
Product | type I secretion outer membrane protein, TolC |
Protein accession | YP_002512567 |
Protein GI | 220933668 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC GACTGCATCG CATCCTCCTG TCCCTGACCC TGGGCGCCGT GCTCCTGCTG CCCACCAGCC AGGCGGCGGA CCTCTGGACC ATCTACCAGA CGGCCCTGCA GCACGATGCC GAACTGCGCG CCGCAGAGGC CGACTACCGG GCCGCTCTGG AGGCCCGCCC CCAGGCCCGC TCCGTGCTGC TGCCCCAGAT CGATGCCGGT GCCACCCAGG CGCACACCCG CAGTGAACCG TCCCCCGGCT CCAGTTTCAG CTACGACACC ACCCGCTTCG ACATCACCCT GAACCAGAGC GTCTACGACC ACCGCAACTA CGTGGCCCTG CGCCAGGCGG ACCTGGGCAT CGCCCAGGCC ACAGCGTTCC GCGACGCCGC CCGCCAGGCC CTGATCCTGC GCGTGGCCGA GTCCTACTTC GGCGTGCTCA CTGCCCAGGA CACCCTGTCC TTCGCCGAGG CCGAGAAGGA GGCCATCGGC CGGCAGCTGG AACAGGCGGA GCGGCGTTTC GAGGTGGGGC TGATCGCGAT CACCGACGTG AAGGAATCCC AGGCCCAGTT CGACATCGCC GTGGCCCAGG AGATCGCCGC CCGCAACCAG CTGGACATCG CCCGGGAACA GCTGGCAGTG GTCACCGGCC AGTACTACGA GGCCCTGGCC AGTCTGAGCG ACCGCCTGCC CCTGACCACG CCGGAACCCG CCGACATGAG CCGCTGGGTG GAGAGCGCCA TCGACCGCAA CCTGGGCCTG ACCGCCCGGC GCTTCGCCAC CGAGGCCGCC GCCGAGGAGA TCAAGCGCCA ACGCGCCGGC CACTACCCCA CCGTGGGCCT GCAGGCCAGC TACGCGGACA TCGACAACAG CGGCGCCCCG ACGGCCAACT CCCAGCTCCT GGACCGCACC GACGCCCAGA TCGCCCTGCA GCTGCGCGTG CCCATCTACA GTGGCGGGCG CACCTCCTCG CTCACCCGCG AGTCCCGGGA ACGCTTCGAC AGCGCCCGTG AACAGCTGGA ACTGACCCAG CGCCTGACCG TGCAGCAGAC CCGCAGTGCC TACCTGTCCG TAGTCGCCGG GATCTCCCGG GTGCAGGCCC TGAACCAGGC CCTGGCCTCC ACCCAGGCCG CCGCCGAGGC CGCTGAGGCG GGCTTCGAGG TGGGCACCCG CACCGCCGTG GACGTGCTGC TGGCCCTGCG CGAGGTGTTT CGCGCCCAGC GGGACTACGC CCAGGCCCGC TATGAATTCG TGGTCAACAC CCTGCGCCTG AAGCAGGCCG CCGGCACCCT GGACGAGCAG GACATTCAGG CCATCAACGC CTGGCTGGAG TGA
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Protein sequence | MTTRLHRILL SLTLGAVLLL PTSQAADLWT IYQTALQHDA ELRAAEADYR AALEARPQAR SVLLPQIDAG ATQAHTRSEP SPGSSFSYDT TRFDITLNQS VYDHRNYVAL RQADLGIAQA TAFRDAARQA LILRVAESYF GVLTAQDTLS FAEAEKEAIG RQLEQAERRF EVGLIAITDV KESQAQFDIA VAQEIAARNQ LDIAREQLAV VTGQYYEALA SLSDRLPLTT PEPADMSRWV ESAIDRNLGL TARRFATEAA AEEIKRQRAG HYPTVGLQAS YADIDNSGAP TANSQLLDRT DAQIALQLRV PIYSGGRTSS LTRESRERFD SAREQLELTQ RLTVQQTRSA YLSVVAGISR VQALNQALAS TQAAAEAAEA GFEVGTRTAV DVLLALREVF RAQRDYAQAR YEFVVNTLRL KQAAGTLDEQ DIQAINAWLE
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