| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0463 |
|---|
| Symbol | |
|---|
| ID | 7316549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 493712 |
|---|
| End bp | 496624 |
|---|
| Gene Length | 2913 bp |
|---|
| Protein Length | 970 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643615347 |
|---|
| Product | (Glutamate--ammonia-ligase) adenylyltransferase |
|---|
| Protein accession | YP_002512548 |
|---|
| Protein GI | 220933649 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.291953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC TTCCGCCCCG CCCCTCCCTG GACGTCCTCC CCGAAGCCCT GCGCCCGGAC
CTGATCCGTC TGCTGGATGA TTTCGAGTCT GCCTGTGCCC GCGACGGGAT CGCCCTGGAC
CACTGGCCCG AGGCGCTGGT ACGGGTCTGG GCGGGCAGCG GGTTCGCGGC GCGCATCGCC
ATCCGCCGGC CGAACCTGCT CCTGGAGCTG ATCCAGGACG GGACCCTGGC CCGCCCCCTG
GAGGCCGGGG AGATGGCGGC CCGGGTGAGC GCGGTGGTCC AGGCGGCGCA GGACGAGGCC
GCCCTCATGC GCGACCTGCG CCTGTTGCGT CAGCGGGAGA TGATGCGCAT CGCCTGGCGC
GACCTGAGCG GCGAGGCGGG CCTGGACGAG ACCCTGGGTG ATCTCACGGA TCTCGCCGAA
CACTGCATCG ACCAAGCCGC CGCCTGGGTC CATGGCCAGC TGGTGCAGCG CCACGGGGAG
CCCCGGGACG CCGAGGGCCG GCCCCAGCGC CTGGTGGTGC TGGGCATGGG CAAGCTGGGC
GGCCGGGAAC TCAACTTCTC CTCCGACGTG GATCTCATCT TCACCTATGC GGCCCGGGGC
GAGACCGACG GCGAGAAGCC CCTGGACAAC CAGCAGTTCT TCATCCGCCT GGGCCAGCGC
CTGATCCGCC TGCTGGACGA GAACACCGCA GAGGGCTTCG TGTTCCGGGT GGACATGCGG
CTGCGGCCCT TCGGCGACGC CGGTCCCCTG GTCATGGATT TCGACACCCT GGAGGGCTAC
TACGAGAGCC ATGGCCGGGA ATGGGAGCGC TACGCCCTGA TCAAGGCCCG GGTGGTGGCC
GGCGACAGGG AGGCGGGCCG GGAGCTGATG CGCGCCCTGC GGCCCTTCGT GTTCCGCCGC
TACCTGGACT ACGGCGCCTT TGCCGCCCTG CGCGACATGA AGGCCATGAT CAACCGGGAG
GCGGCGCGCC GCAGCCGCGG CGATGACGTG AAGCTGGGCG AGGGGGGCAT CCGGGAGGTG
GAGTTCATCG GCCAGGCCTT CCAACTGATC CGCGCCGGCC GTGACCCCCG CCTGCAGCTG
CGCGGCATCC GCCCGGTGCT GCGCCGCCTG GCGGAGATGG AGCTGATGCC CGGCTACGTG
GTGGACCAGC TCATCACCGC CTACGAGTTC CTGCGCCGCA CGGAAAACCA TCTGCAGATG
GCCCAGGACC AGCAGACCCA TCGCCTGCCC GAAAGCGACG AGGCGCGCCT GCGTCTGGCC
TTCTCCATGG GCCATGACGA CTGGGAGGGT TTCTCCCGGG AGCTGGCCCG TCACCGGCGC
CGGGTCCAGG AGCATTTCCA GCAGGTGTTC GCCGCACCCC AGGGCGAGGC GGAGGAGGCG
GCCGGGGCCG AAGGTCCGGG GCAGGCCGTG CTGGCCTCCA TCTGGGCGGG CGACCGCTCC
GGCGAGCGGG CCCAGGCGGT ACTGGCGGAG GCGGGATTCC GGGACGCACC CAAGGCCCTG
GAGTGGATCG AGGACCTGCG CGAGGGTGCC GCCTGCCGCT CCCTGACCGC CACGGGCCGC
GAACGTCTGG ACCAGCTCAT GCCCCTGCTG CTGGGTGCCG CCGCCGGTGC CGAGGACCCG
GATACCGTCC TGTCCCGGCT GGTGACCCTG GTGCGCAGCA TCGCGCGTCG TTCGGTGTAC
CTGTCCCTGC TGGTGGAAAG CCCCATGGCC CTCTCCCAGC TGGTGAAACT CTGCGACGCG
AGCCCCTGGA TCGCCCAGCT GCTCACCCGC CACCCCCTGC TGCTGGATGA GCTGCTGGAC
CCGCGCAGCC TCTACGCGCC CATGGACCGG GAGGGTCTCT CGGCGGAACT GGACGAGGAG
CTGTCCCAGG TACCGGAAGA CGACATGGAG CAGATGATGG ATCGCCTGCG CCAGTTCCAG
CAGGTGCAGA TGCTCAAGGT GGCCGCCGCC GACATCATGG GCGTGCTGCC GCTCATGAAG
GTGAGCGACC ACCTCACCTG GATCGCCGAG GTGGTCCTGG AACGGGTGCT GTCCCTGGTC
ATGGCCCAGC TGCATGCCCG CTATGGCCGC CCCCGCTGCC TCATCGACGG GCGGCCCTAC
GAGCCGGGTT TTGCCATCAT CGGCTACGGC AAGCTGGGCG GCCTGGAACT GGGTTACGGC
TCGGACCTGG ACATCGTGTT CCTGCACGAC AGCGCCGGCG AGCAGCAGAT GACCGACGGC
GACAAGGCCC TGGACAACAG CGAGTTCTTC GCCCGCCTGG GCCAGCGCAT CGTGCACGTG
CTCGGCACCT ATACCGGCGC CGGCCGGCTC TACGAGGTGG ACACGCGCCT GCGCCCGAGC
GGCGCCTCGG GCCTGCTGGT GAGCAGCCTC AAGGCCTTCG AGCTCTACCA GGAGACCAAG
GCCTGGACCT GGGAGCACCA GGCCCTGGTG CGCGCCCGGC CGGTGGCTGG CGATGCGCAC
ATCGCCGAGG GCTTCGCCGA GATCCGCCGG CGTGTGCTCG GCATCTGCCG CGACAGGGAG
AAGTTGCGCC AGGAAGTGCG CGAAATGCGC GAGAAGATGT GGTCCGAACA CGCCTCCCGG
GACCCGTCCC GGTTCAACCT CAAGCGGGAT CCGGGTGGTA TCGCCGACAT CGAATTTATG
GTCCAATACT GGGTTTTGGC GTACGCCTGC GATCACCCGC CGCTGCTGGA TTACCCGGAC
AACATCCGCA TCCTGGAGCG CCTCGTGGTC ACCGGCGTGC TGCCGGAAGA GGATGCCCGC
TTCCTGACCG ACACCTACCG TGAATTCCGC AACCGCATCC ACCGGCTGAC CCTGCAGGAG
TCGGACGCGG TGGTGGACGC GGCCGAGTTC GCCGAGCAGC GCGAGACCGT GCGCGCTCTG
TGGCGCCGGG TGATGGAGGA AGGCAAGGCT TGA
|
|---|
| Protein sequence | MNSLPPRPSL DVLPEALRPD LIRLLDDFES ACARDGIALD HWPEALVRVW AGSGFAARIA
IRRPNLLLEL IQDGTLARPL EAGEMAARVS AVVQAAQDEA ALMRDLRLLR QREMMRIAWR
DLSGEAGLDE TLGDLTDLAE HCIDQAAAWV HGQLVQRHGE PRDAEGRPQR LVVLGMGKLG
GRELNFSSDV DLIFTYAARG ETDGEKPLDN QQFFIRLGQR LIRLLDENTA EGFVFRVDMR
LRPFGDAGPL VMDFDTLEGY YESHGREWER YALIKARVVA GDREAGRELM RALRPFVFRR
YLDYGAFAAL RDMKAMINRE AARRSRGDDV KLGEGGIREV EFIGQAFQLI RAGRDPRLQL
RGIRPVLRRL AEMELMPGYV VDQLITAYEF LRRTENHLQM AQDQQTHRLP ESDEARLRLA
FSMGHDDWEG FSRELARHRR RVQEHFQQVF AAPQGEAEEA AGAEGPGQAV LASIWAGDRS
GERAQAVLAE AGFRDAPKAL EWIEDLREGA ACRSLTATGR ERLDQLMPLL LGAAAGAEDP
DTVLSRLVTL VRSIARRSVY LSLLVESPMA LSQLVKLCDA SPWIAQLLTR HPLLLDELLD
PRSLYAPMDR EGLSAELDEE LSQVPEDDME QMMDRLRQFQ QVQMLKVAAA DIMGVLPLMK
VSDHLTWIAE VVLERVLSLV MAQLHARYGR PRCLIDGRPY EPGFAIIGYG KLGGLELGYG
SDLDIVFLHD SAGEQQMTDG DKALDNSEFF ARLGQRIVHV LGTYTGAGRL YEVDTRLRPS
GASGLLVSSL KAFELYQETK AWTWEHQALV RARPVAGDAH IAEGFAEIRR RVLGICRDRE
KLRQEVREMR EKMWSEHASR DPSRFNLKRD PGGIADIEFM VQYWVLAYAC DHPPLLDYPD
NIRILERLVV TGVLPEEDAR FLTDTYREFR NRIHRLTLQE SDAVVDAAEF AEQRETVRAL
WRRVMEEGKA
|
|---|
| |