| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0460 |
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| Symbol | |
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| ID | 7316546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 490622 |
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| End bp | 491692 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643615344 |
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| Product | twitching motility protein |
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| Protein accession | YP_002512545 |
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| Protein GI | 220933646 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.16697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCG TCGATGCGCT GCTGACCCGC ATGGTGGAAA TGGATGGCTC CGACCTGCAC
ATGATGGCGG GCGATCCGCC CCGGGTACGT GTCTACGGGG AGCTCAAGCC CATTGAAGAG
GCACCCATGA GCGCCGAGTC AGTCTCCGAT GCCCTGGCGG AGATACTGCC GGATCATTCA
CGGCTTGTCT TCGAGCGGGA AGATGGCGCC GATTTCGCCT ACGAGATCCC GGGGCTGTCA
CGATTCCGGG TCAACATGCT GCGTCAGATC AACGGCATCG GCGCGGTGTT TCGCGGCATC
CCTTCCCGCT CCCTGAGCCT GGATGATCTG GGGCTTCCAC CGGTAGTCTC CAGCCTGAGC
ATGCAGCGAC ACGGCATGGT CCTGGTCACC GGCAAGACGG GCTCGGGTAA GACCACCACG
CTTGCGGCCA TCGTCGATGA CGTCAATGCC CGTCGCAAGG GCCACATCAT CACCATTGAA
GACCCCATCG AGTTCATCCA TGAACGCAAA CGCTCGCTGA TCAGCCAGCG CCAGGTGGGG
CTGCACACGC CAAGCTTCTC CAGTGCCTTG CGCTCGGCGC TGCGCGAGGA TCCGGATGTC
ATTCTGGTGG GTGAGATGCG CGATCTCGAG ACCATCAGCC TGGCGGTGAC TGCCGCCGAG
ACCGGTATCC TCGTGCTCGG AACCCTGCAT ACCAGCGGAG CGGCCTCCAC GGTGGACCGC
ATCATCAACA CCTTCCCGGC ACAGAAACAG GCGCAGATCC GCACCATGCT CTCCACCTCC
CTGCGTGGCG TCATCTCACA GCAGCTGGCG CGGCGCGCCG ACGGCAAGGG CCGCGTGGCG
GCCATCGAGA TCCTGGTGAA CACCCCGGCG GTCTCGAATC TCATTCGCGA GGGGCGTACC
GAGCAGCTGG AGAGCACCAT GCAGAGCGGT GCCCTGGTGG GCATGCAGAC CATGGACTCG
GCCCTGCGCC GGCTGCTGGA TGCGGGCACC ATCACCGGGC GGGAGGCCTA CGAGAAGGCC
ATCAGCAAGG CGGAGTTCGA GACCGTGCGC CACGAGGGTG TAAAGCGCTG A
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| Protein sequence | MKRVDALLTR MVEMDGSDLH MMAGDPPRVR VYGELKPIEE APMSAESVSD ALAEILPDHS
RLVFEREDGA DFAYEIPGLS RFRVNMLRQI NGIGAVFRGI PSRSLSLDDL GLPPVVSSLS
MQRHGMVLVT GKTGSGKTTT LAAIVDDVNA RRKGHIITIE DPIEFIHERK RSLISQRQVG
LHTPSFSSAL RSALREDPDV ILVGEMRDLE TISLAVTAAE TGILVLGTLH TSGAASTVDR
IINTFPAQKQ AQIRTMLSTS LRGVISQQLA RRADGKGRVA AIEILVNTPA VSNLIREGRT
EQLESTMQSG ALVGMQTMDS ALRRLLDAGT ITGREAYEKA ISKAEFETVR HEGVKR
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