| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0427 |
|---|
| Symbol | |
|---|
| ID | 7317257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 452684 |
|---|
| End bp | 453178 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615311 |
|---|
| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
|---|
| Protein accession | YP_002512512 |
|---|
| Protein GI | 220933613 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.531523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCT TTCGCCCCAA GTCCGAGATC CGCAAGCTGG TGATCCACTG CGCGGATACG
CCCAACGGCC GCCCCCATAC CGCCGCCGAC ATCGATCGAT GGCACGGCGA GAACAATCCC
CCATTCGTAC GACGTGCGCC GAGCGGCGGC AGCACGGTGT TCGGGCACAT CGGCTACCAC
TGGGTGATCC GCCTGAGCGG TGCGAGCGAG GTGGGCCGGG GGATCGAGGA GACAGGCGCT
CATGCAGGGC CTCGCCACAA TGCAGACAGC CTGGCTGTTT GCCTGGTCGG CCGCGACAAG
TTCACCCGGG CGCAGTGGGA TACTCTGCGC CATCTCGTCA CCGGGCTGCG CAAGCAATTC
CCCCATCTGG AAGTCACCGG CCACCGGGAT CTGCCCGGCG TGCCGCCACG CACCTGCCCC
GGATTCTCGG TTGCCGACTG GCTCGCCAAC AGCATGCAAC CCCTGCCAGA ACACCTATTG
GAGGAGTCGC CGTGA
|
|---|
| Protein sequence | MSRFRPKSEI RKLVIHCADT PNGRPHTAAD IDRWHGENNP PFVRRAPSGG STVFGHIGYH
WVIRLSGASE VGRGIEETGA HAGPRHNADS LAVCLVGRDK FTRAQWDTLR HLVTGLRKQF
PHLEVTGHRD LPGVPPRTCP GFSVADWLAN SMQPLPEHLL EESP
|
|---|
| |