| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0335 |
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| Symbol | |
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| ID | 7316474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 376211 |
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| End bp | 377497 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615219 |
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| Product | surface antigen variable number repeat protein |
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| Protein accession | YP_002512420 |
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| Protein GI | 220933521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGCCG TGCTGCGTGG CCTTGCGGCC TTGTTGCTGT TTCTTCCCCT GCTGTTCTGC
ACACCGGTGC TTGCCCAGAC GAGCGCGCCG CTCGTGAGCG AGATCCGTTT CGAGGGCAAC
CGGGTGACAC GGGAGTCCGT GTTGCGCCAG GAACTGCTGA TCCGCGAGGG TGAGCATGCA
ACGCCTGAAC GTATCGAGGC CTCGCGCCAG TCCATCATGA ACCTGGGGCT GTTCAAAAAC
GTGGAGACGG ACGTCGACAC GCAGCCCGAT GGCCTGGTGG TGACCTTTCA TCTCACCGAG
AAGTATTTCT ATTTCGCCCT GCCCCGGCTC AACCGCAGCT CAGACGGCGA CATCCGCTAC
GGCGGCGAGC TGCGTGCCGA CAACCTGTTC GGTCTCAATC AGCAGCTGCG CCTGCTGTAC
GAGCTGGAGG AGAACGGTGA TGGCGGTAGT GAGCAGGGCT CCAGCCAGTT CAGTCTCGAC
TACAACGTGC CCCGGGTGCC GTTTACCCGC TTCGGCGCAG GCCTGAGCCT GGGTGAAAAG
GTCACGGATC AGTCCCCCTC GGGTGGCGAT CTCCCGGATC TCTATGAACA GCGCAGCCGC
CATGTGGGCC TGTCCCTGTC GCGCTGGCTG GACCGGCGTG GTCCCAGCCG GGGCTGGCGC
ATGACCCTGG GCACACGCTG GGAGTCCCGT TCCTTCAGCG CCCTGGACCC GGGCGCGGCC
GTGCCCGAGG ACGGCGAGGA CGTGAGCTGG GGCGTTGGCG TGAGCTTCAC CGACGTGGCG
GATCTCGGCG TGCGCAGGGA GGGCGTGGCC TACGGCGGCG GCATCTCCTT CGGCAGCACG
GAACTGGGTG CGGACCGGGA TCACCAGCGC ATTGACCTCT TCTACCGCCG CTACCAGACC
CTGGGCGGCG ATCTCCCGGC GAGCCTGTAC TGGCAGCTGC GGGGCGGCTG GGCCGGCGAC
ACCCCCTTTG GTGACGACGC CTACAGCATC GGCAGCGGCT CAAGCCTGCG GGGCTATACC
CGGGATTTCC GCACCGGCGA CATGCAACTG CTGGCCAACG TGGAGTACCT GCACCCGCTG
TTCGGTAACC CGGCCGTGCG CGGCGTGGTG TTCACGGACA TCGGCGGTGT CTGGGACAAG
GATGATATCG ACCCGGGCGA CATCCACGTG GGCGCGGGCG TGGGCCTGCG CATCAACCTG
CGCTGGTTCG TGAGAACGGA TATCCGGGTG GATGCCGCGT ACGGCAACGA GGGAAGGGTG
TACGCGGGGA CGAGTCACAC ATTTTAG
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| Protein sequence | MKAVLRGLAA LLLFLPLLFC TPVLAQTSAP LVSEIRFEGN RVTRESVLRQ ELLIREGEHA
TPERIEASRQ SIMNLGLFKN VETDVDTQPD GLVVTFHLTE KYFYFALPRL NRSSDGDIRY
GGELRADNLF GLNQQLRLLY ELEENGDGGS EQGSSQFSLD YNVPRVPFTR FGAGLSLGEK
VTDQSPSGGD LPDLYEQRSR HVGLSLSRWL DRRGPSRGWR MTLGTRWESR SFSALDPGAA
VPEDGEDVSW GVGVSFTDVA DLGVRREGVA YGGGISFGST ELGADRDHQR IDLFYRRYQT
LGGDLPASLY WQLRGGWAGD TPFGDDAYSI GSGSSLRGYT RDFRTGDMQL LANVEYLHPL
FGNPAVRGVV FTDIGGVWDK DDIDPGDIHV GAGVGLRINL RWFVRTDIRV DAAYGNEGRV
YAGTSHTF
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