| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0322 |
|---|
| Symbol | |
|---|
| ID | 7316298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 365043 |
|---|
| End bp | 366254 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643615206 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_002512407 |
|---|
| Protein GI | 220933508 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAGG TCTTCGTCGG CAGACAACCC ATCTACGACC GCGAGATGCG GGTGCGTGCC
TACGAGCTGC TGTTTCGCTC CAGCAGCGAA AATCGCGCAG CCTTCGTGGA TGGCGACGCA
GCCAGCAGCG AGGTGATCCA CGGCACCTTC ATGGACCTGG GCCTGGATCG CATCGCCGGT
GACAAGACCG TCTTCATCAA CCTCACCCGC AACCTGCTCA TGAGCGAAGG CATCCTCGCC
TTCCCGCCCG ACCGGGTGGT GCTGGAGGTG CTGGAGGACG TGGAGATCGA CGACGATCTG
CTCGCCGCCC TGCGCCTGCT CAATCACAAG GGCTATCGCA TCGCCCTGGA TGACTTCGTC
TACCGGGAAG GTCCCCAGCC CCTGCTGTCC ATGGCGGACA TCGTCAAGGT GGACCTGGGC
CAGCTGCACA ACGGCGAACT GGAAGACCAG GTGCGCCAGT TGCGCAGCCA CAAGGTGCAG
CTGCTGGCGG AGAAGGTGGA AGACCGGGAA CAGTACACCC TGTGCCGGGA TCTGGGCTTT
GAATACTTCC AGGGCTACTA CCTGTGCCGC CCCAACGTGG TGCGCGGGCG GCGGGTGACC
ACCAACCGGC TCACGGTGAT CCAGCTCATC AACAAGCTGC ACCAGCCGGA CATGGACCTG
CGGGACCTGG AGCAGACCAT CGCCAACGAC GTCTCGCTCT CCTACCACCT GCTGCGCTTC
ATCAACTCCG CCTACTACGG CCTGAGCAAG CCCATCGAGT CCATCCACCG GGCCGTGGTC
TACCTGGGCC GGGACGCCAT CCGTCACTGG GTCACCCTGC TGGCCCTGCG CAGCCTCAAG
GACCAGCCCA CGGACGTGCT CATCAACGCC CTGGTGCGCG CACGCATGTG CCAGCTGCTG
GCCGAGCAGG GGCGCTTCCT GTCGCTGCAG GACAGCTTCT TCACCGTGGG CCTGTTCTCA
ACCCTGGAAC AGGTGCTGCA GGCCCCCATG GCCGAGATCC TGGGCGAACT GCCCATGAGC
GAGGAGATCA ATGCCGCCCT GCTGCGCCAG GAAGGGGTGA TGGGCGAGGC GCTCGCCTGC
ACCCTGGCCT TCGAGCAGGA AAGCCCGGAC AGCGCCCGAC GCTTCCGCGA CCTGGACCCG
GTGCAGACCG GACGCCTCTA CCTGGAGGCC CTGGCCTGGG CCAATGAGCT GAAGGAGCAG
ATGGGGATTT AG
|
|---|
| Protein sequence | MPEVFVGRQP IYDREMRVRA YELLFRSSSE NRAAFVDGDA ASSEVIHGTF MDLGLDRIAG
DKTVFINLTR NLLMSEGILA FPPDRVVLEV LEDVEIDDDL LAALRLLNHK GYRIALDDFV
YREGPQPLLS MADIVKVDLG QLHNGELEDQ VRQLRSHKVQ LLAEKVEDRE QYTLCRDLGF
EYFQGYYLCR PNVVRGRRVT TNRLTVIQLI NKLHQPDMDL RDLEQTIAND VSLSYHLLRF
INSAYYGLSK PIESIHRAVV YLGRDAIRHW VTLLALRSLK DQPTDVLINA LVRARMCQLL
AEQGRFLSLQ DSFFTVGLFS TLEQVLQAPM AEILGELPMS EEINAALLRQ EGVMGEALAC
TLAFEQESPD SARRFRDLDP VQTGRLYLEA LAWANELKEQ MGI
|
|---|
| |