Gene Tgr7_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0301 
Symbol 
ID7316277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp340522 
End bp341121 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID643615186 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002512387 
Protein GI220933488 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0864199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAAT CCGGCGAGGA ACGGCGGGAA GAGATCGTCC AGGCGGTGCT GGATCTTGCT 
GCCGAGCGGG GCGTGGGGCA GGTGACCGCC CAGGCTATCG CGGACCGGGT GGGCATCGCC
CAGCCCACGG TCTTCCGCCA CTTCAAGACC CGCGACGCCA TCCTCCGGGC CGCCCTGGAG
TGGATCGGCA AGGGGGTGCT CACCGTGCTG ACGCCCATCT TCGCCGGATC CGGTCCGGCC
GACGAGCGCC TGCGCCAGCT CCTCTCGCGG CAGTTGCAGT TCATCAGCCA GCGCAGGGGG
CTGCCGCGCC TGCTGTTTTC GGAACGCCTG CACATGGAGG ACCCGGAACT CAAGGCCGTC
GTGCGGCGGA TCATGGAGAC CTACACGGGG CGGGTCAGGT CACTGCTGGA TGAGGGCGTG
GACGAAGGCA AGTTCCGCCC CGACCTGGAT ACGGAAGAGA CGGCCCGGCT CATCACCGCC
CTGGTGCAGG GACTGGTGAT GCGCTGGTCC ATCAGCGACT TCGAGTTCCC CCTGGAGGCC
CAGGGCGACA CCCTGTGGCG GCTGTTGGAG CCGGCGCTCG AGGCGCGCTG GACACCCTGA
 
Protein sequence
MRKSGEERRE EIVQAVLDLA AERGVGQVTA QAIADRVGIA QPTVFRHFKT RDAILRAALE 
WIGKGVLTVL TPIFAGSGPA DERLRQLLSR QLQFISQRRG LPRLLFSERL HMEDPELKAV
VRRIMETYTG RVRSLLDEGV DEGKFRPDLD TEETARLITA LVQGLVMRWS ISDFEFPLEA
QGDTLWRLLE PALEARWTP