Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0301 |
Symbol | |
ID | 7316277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 340522 |
End bp | 341121 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643615186 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002512387 |
Protein GI | 220933488 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0864199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAAT CCGGCGAGGA ACGGCGGGAA GAGATCGTCC AGGCGGTGCT GGATCTTGCT GCCGAGCGGG GCGTGGGGCA GGTGACCGCC CAGGCTATCG CGGACCGGGT GGGCATCGCC CAGCCCACGG TCTTCCGCCA CTTCAAGACC CGCGACGCCA TCCTCCGGGC CGCCCTGGAG TGGATCGGCA AGGGGGTGCT CACCGTGCTG ACGCCCATCT TCGCCGGATC CGGTCCGGCC GACGAGCGCC TGCGCCAGCT CCTCTCGCGG CAGTTGCAGT TCATCAGCCA GCGCAGGGGG CTGCCGCGCC TGCTGTTTTC GGAACGCCTG CACATGGAGG ACCCGGAACT CAAGGCCGTC GTGCGGCGGA TCATGGAGAC CTACACGGGG CGGGTCAGGT CACTGCTGGA TGAGGGCGTG GACGAAGGCA AGTTCCGCCC CGACCTGGAT ACGGAAGAGA CGGCCCGGCT CATCACCGCC CTGGTGCAGG GACTGGTGAT GCGCTGGTCC ATCAGCGACT TCGAGTTCCC CCTGGAGGCC CAGGGCGACA CCCTGTGGCG GCTGTTGGAG CCGGCGCTCG AGGCGCGCTG GACACCCTGA
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Protein sequence | MRKSGEERRE EIVQAVLDLA AERGVGQVTA QAIADRVGIA QPTVFRHFKT RDAILRAALE WIGKGVLTVL TPIFAGSGPA DERLRQLLSR QLQFISQRRG LPRLLFSERL HMEDPELKAV VRRIMETYTG RVRSLLDEGV DEGKFRPDLD TEETARLITA LVQGLVMRWS ISDFEFPLEA QGDTLWRLLE PALEARWTP
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