| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0254 |
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| Symbol | |
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| ID | 7316832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 278712 |
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| End bp | 282584 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643615139 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_002512340 |
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| Protein GI | 220933441 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCTCCC CCGACACCCT GTCCGCCCTG ATCTCCGAGT GCCTGTCCCG GGACCGCGAT
GCCCTGGCCC GCGACCTTGC GCGCCTGCAA AGGCGCATCG CCTCGGGCAA GCCCGCCGAC
CGCATGGCGG TGGATCTGGA AGGCCGCATC GAGGCCTCCC GCGCGGCCCG TGCGGCGCGC
CTGGCCAGTC TGCCCATAAC CCGCTTCCCC GAGGACCTGC CGGTCTCGGA ACACCGGGAC
GAAATCGCCA AGCTGATCAG CGAGCACCCG GTCGTGGTGA TCTGCGGCGA GACCGGCTCC
GGCAAGACCA CCCAGCTGCC CAAGATCTGC CTGGCACTGG GGCGCGGCGT GGACGGACTC
ATCGGCCACA CCCAGCCCCG ACGCATCGCC GCACGCTCGG TGGCGTCCCG CATCGCCGAG
GAGCTGGACT CGCGGATCGG CGAGGCGGTG GGCTTCAAGG TACGCTTCTC GGATCACACC
CGGCCCGAGA GCTATATCAA GCTCATGACC GACGGCATCC TGCTCGCCGA ACTGCGCAGC
GATCCGGACC TGCGGGCCTA CGACACGTTG ATCATCGACG AGGCCCACGA GCGAAGCCTC
AACATCGACT TCCTGTTGGG CTACCTCAAG GGCCTCATGC CCAGGCGCCC GGACCTGAAG
CTGATCATCA CTTCCGCCAC CCTGGACCCG GATCGCATCG CCGCCCACTT TGGTGAGGCG
CCCATCTACC AGGTGCCGGG TCGCACCTAC CCGGTGGAGA CCCGCTACCG GCCGGTGCAG
TCGGAGGACG AGGACAGCGA GCGGGACCTG AACACCGCGC TGCTGGAGGC GGTGGACGAG
CTGGCCGCCG AGGGACCGGG CGACGTGCTG GTGTTCCTGC CCGGCGAGCG GGAGATCCGC
GAGGCGGCGG AGGCCCTGCG CAAGCATCAC CCCAGGCACA CCGAGATCCT GCCCCTGTAC
GCGCGCCTCT CGGCCACCGA GCAGAACAAG GTCTTCGCCC CCCACACGGG CCGGCGCGTG
GTTCTGGCCA CCAACGTGGC GGAGACCGCG CTCACAGTGC CGGGCATCCG TTACGTGGTG
GACACGGGTC TGGCGCGCAT CGCCCGCTAT GCCTGGCGCT CCCGGGTGCA GCGCCTGTCG
CTCGAGCCGG TGTCCCAGGC CTCCGCCAAT CAGCGTTCCG GCCGCTGCGG CCGTCTGGGA
CCGGGCGTGT GCATCCGCCT GTACTCGGAG GACGATTTCA CCCTGCGCCC CGCGTTCACC
GACCCGGAGA TCCTGCGCTC CAACCTGGCC TCGGTGATCC TGCAGATGGC CAACCTGGGC
CTGGGCGATC CGGAACACTT CCCCTTCGTG GACCCGCCGG ACCCGCGCCT GATCCGCGAC
GGCTTCAAGC TGCTGGAGGA ACTGGGCGCG GTGGACGGCA GACACCGCAT CACCGGCACC
GGCCGCAAGC TCGCCCGCCT GCCGGTGGAC CCTCGCCTGG GCGCCATGCT CCTGGCCGCC
GGGCGAGAGG GCGCGGTGGT GGAACTGCTG CGCATCGTCG CCTTCCTGGC CATCCAGGAC
CCCCGGGAGC GTCCCGCCGA AAAACGCCAG GCGGCGGACG AGGCCCACGC CCGTTACCGG
GAGGCGGGCT CGGATTTTCT TAGCTGGCTG AAGCTCTGGG ACGACTGGCG CGAGCAGCAG
CGCCACCTCA CCAGGGCCAA GCTGCGCGCC TGGTGCCGGG AAGGGTTTCT CTCCTTCATC
CGCATGCGCG AGTGGCAGGA TCTGCACGGG CAACTGCGCC AGGCCCTCGG GGAACTGGGG
CTCAAGGAAA ACCAGCAGCC GGCGGAGCCG GAGGCCATCC ACCGCGCCCT GCTCGCCGGC
CTGGTGAGCC AGGTGGGCCT CAAGACCGAA CGTGGCGACT ACCTGGGCGC GCGCAACCGC
CGCTTTCACA TCCACCCGGC CTCGGGCCTG TTCAAGAAGG CGCCCGCCTG GGTCATGGCC
GCGGAGATCG CCGAGACCAC CAAGGTCTAT GCCCGGGAGT GCGCCGCCAT CCGGCCCGAG
TGGCTGGAGA CGGTCGCGCC CCACCAGCTC AAGCATCACT ACTTCGAGCC CCACTTCGAG
GAGCGCCGGG GCACCGTGGG CGCCTACGAC CGGGTCACCC TCTACGGGCT CACGGTGCAC
CCGAAGAAGC GCGTGAACTA CGGGCGCATC GATCCCGCCG ATGCGCGCCG GGTGTTCATC
CGCGAGGGCC TGGTGGCCGG GCGGCTGCGC AGCCAGGCAG CGGCGCTCAA GCACAACCTG
GCCCTGATCC GGGAGATCGA GGACCTGGAG GCCCGGGGCC GGCGCCGGGA CCTGCTGGCG
GACGAACAGG TGCTCTACGA CTTCTACGAC GCCCGCATCC CCGCCGAGGT GCACGACGCC
GCCTCCTTCG AGCGCTGGCG CAAACAGGCG GAGCGGGACG ACCCGCAGAT CCTCAAGCTC
AGCCGCGAGG CCCTGCTGCA ACAGGACACC GGCACCCTGG GCCCGGAACG CTTCCCCGAC
CACCTGGAGA CCGGCGGCAT CCGCCTGCCG CTCTCCTATC GCTTCGAGCC CGGCGCGGAG
GACGACGGCG TGACGCTCAC CGTGCCCCTG GCCGCGCTCA ACGGTCTCGA TCCCTACGTG
GGCGAATGGC TGGTGCCCGG CCTGCTGGAG GAAAAGCTCA CCGCGCTGAT CAAGAGCCTG
CCCAAGGGCC TGCGCCGCAA CTTCGTGCCC GCACCCGATT TCGCCCATGC GTGCCTGGGC
CGCCTGGGCC CACCCGACGG CCCGCTGACC CTCGCCCTGT CCCGTGTGCT GCGCGCCATC
ACCGGCACCG AGATCCCCGC CGATGCCTGG CGCCCGGAGA CCCTGGAGCC GCACCTGCAA
CTGCGCTACC GGGTGGTGGA CAGGAAGAAC CAGACCCTGG CCACCGGACG GGATCTTGCC
GAGCTGCGTG ACCGGCTCTC CGGCCGGGCC CGTGAGAGCT TCGCCGCCCA GCGCCCCCGG
GGATTCGAAC GGCAGGGGCT CATGGACTGG GACTTCGGCG AGCTGCCGGA TCACGTGGGC
TTCGAACAGC ACGGTGCGCA GCTACGCGGC TATCCGGCCC TGGTCGATCG CATTGACCAT
GTGGACCTCA CCCTGGCCGA CAGTCCCGCC AAGGCGCGAC AGATCCACCG GGCAGGGCTC
AGGCGCCTGT TCATGCTGCG CGCCCGGGAG CCGGTGAAAT ACCTCTACCG CAACCTGCCC
GGCATCCAGA CCCTGTGTCT GCAGTACAAC CCCGTGGACC GCTGCGACGC CCTCAAGGAT
GACCTGGCGT TCGCCGGCGT GGAGCGGGTG TTCATGGCCG AGCCCTGGCC CCGGGACCGG
GAAGGCTTCG AGGCCCGGCT CGAAGCGGGC CGCGGCGAAC TGGTGTCCGA GACCCAGGCC
CTGTGCGAGC TGAGCGCGCG CATCCTCGGC CCCTACCAGC GCATCCGCGC GCGGCTCAAG
GGCAACCTGC CCCTGTCCTG GATCGAGGCG GCCGCCGACA TCCGCGACCA GCTGGATCAC
CTGGTGCGGC CGCACTTCGT GCGGGAGACA CCGCGCCCGT GGCTGGAGCA GATCCCCCGC
TATCTCGCCG CCATCGAGAA ACGCCTGGAG CGCCTGGATC ATGCCCCCGA CAAGGACCGG
CGCATGCGCG TGGACGTGGA GCCTTTATGG GAGGACTGCA AGGCGCGGCT CGTGGCCGCG
GGTGATGCGC CATCAGAGGC GCTGGTGCAT TACCGCTGGC TCATCGAGGA ACTGCGCGTG
GGTCTGTTCG CCCAGGAACT CGGCACGATC GAGAAGGCCT CGGTGAAGCG GCTGGAGGAG
GCGCGCAAGT CGTTGGACAA GGGGGGAGCT TAA
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| Protein sequence | MISPDTLSAL ISECLSRDRD ALARDLARLQ RRIASGKPAD RMAVDLEGRI EASRAARAAR
LASLPITRFP EDLPVSEHRD EIAKLISEHP VVVICGETGS GKTTQLPKIC LALGRGVDGL
IGHTQPRRIA ARSVASRIAE ELDSRIGEAV GFKVRFSDHT RPESYIKLMT DGILLAELRS
DPDLRAYDTL IIDEAHERSL NIDFLLGYLK GLMPRRPDLK LIITSATLDP DRIAAHFGEA
PIYQVPGRTY PVETRYRPVQ SEDEDSERDL NTALLEAVDE LAAEGPGDVL VFLPGEREIR
EAAEALRKHH PRHTEILPLY ARLSATEQNK VFAPHTGRRV VLATNVAETA LTVPGIRYVV
DTGLARIARY AWRSRVQRLS LEPVSQASAN QRSGRCGRLG PGVCIRLYSE DDFTLRPAFT
DPEILRSNLA SVILQMANLG LGDPEHFPFV DPPDPRLIRD GFKLLEELGA VDGRHRITGT
GRKLARLPVD PRLGAMLLAA GREGAVVELL RIVAFLAIQD PRERPAEKRQ AADEAHARYR
EAGSDFLSWL KLWDDWREQQ RHLTRAKLRA WCREGFLSFI RMREWQDLHG QLRQALGELG
LKENQQPAEP EAIHRALLAG LVSQVGLKTE RGDYLGARNR RFHIHPASGL FKKAPAWVMA
AEIAETTKVY ARECAAIRPE WLETVAPHQL KHHYFEPHFE ERRGTVGAYD RVTLYGLTVH
PKKRVNYGRI DPADARRVFI REGLVAGRLR SQAAALKHNL ALIREIEDLE ARGRRRDLLA
DEQVLYDFYD ARIPAEVHDA ASFERWRKQA ERDDPQILKL SREALLQQDT GTLGPERFPD
HLETGGIRLP LSYRFEPGAE DDGVTLTVPL AALNGLDPYV GEWLVPGLLE EKLTALIKSL
PKGLRRNFVP APDFAHACLG RLGPPDGPLT LALSRVLRAI TGTEIPADAW RPETLEPHLQ
LRYRVVDRKN QTLATGRDLA ELRDRLSGRA RESFAAQRPR GFERQGLMDW DFGELPDHVG
FEQHGAQLRG YPALVDRIDH VDLTLADSPA KARQIHRAGL RRLFMLRARE PVKYLYRNLP
GIQTLCLQYN PVDRCDALKD DLAFAGVERV FMAEPWPRDR EGFEARLEAG RGELVSETQA
LCELSARILG PYQRIRARLK GNLPLSWIEA AADIRDQLDH LVRPHFVRET PRPWLEQIPR
YLAAIEKRLE RLDHAPDKDR RMRVDVEPLW EDCKARLVAA GDAPSEALVH YRWLIEELRV
GLFAQELGTI EKASVKRLEE ARKSLDKGGA
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