Gene Tgr7_0241 details

Gene Information

• Locus tag: Tgr7_0241
• ID: 7316819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 259819
• End bp: 261846
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643615126
• Product: TonB-dependent receptor
• Protein accession: YP_002512327
• Protein GI: 220933428
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.571494
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCATGT TTCCACGTCC GTACCAGTCC GCCCTGCTGT GCGTCGCGTT GAGCCTGCCG 
CTGACCGTGG CGGCCGAGAC CCAGCGTCTG GAACCGCTCA CCGTCACGGC CCCCCGCCTG 
GAACGTCCCT GGCTCGACAC CCCCGCCGCC CTGGGCGTGG TGGAACGTGA AGACCTGGAG 
CAGGCCCGCC AGGGCCTGCA GCTGGACGAA TCCCTGGTGC GCATCCCCGG CGTCACCGCC 
CAGAACCGCT ACAACTTCGC CCAGGACCTG CGCGTCTCTA TGCGCGGCTT CGGCGCCCGG 
TCCGCCTTCG GCATCCGCGG CGTGAAGCTG CTGGTGGACG GCATCCCCGA GACCACCACC 
GACGGCCAGA GCCAGGTGGA TGCCATCGAC CTCACTGCCC TGGAGCGCAT CGAGGTCATC 
CGCGGCCCGT CCTCGGTGCT CCACGGCAAC GCCACCGGCG GCGTGCTGGA CATCACCACC 
CGATCGGGTC CGCCCGAGAC CTTCCTGCAG CCGCGCCTCG AGGCAGGCAG CTTCGGCTAC 
CGGCGCATCG GTGTCCAGGC GGGCGGGCAG GCCGAGGATC TCGCCTGGCA CGTGAGCGGC 
TGGGACTTCG CCATGGACGG CTACCGGGAC CACAGCGTTG CGGAGAAGCG CCTGCTGCAT 
TCTCGCCTGG ACTGGGACCT GGCCGCGGGG CACCGCCTGA CGGCGCTTGC CACGTTTCTG 
GACGCGCCGC GCACCGATGA TCCGGGCGCG CTGACCGCCG CCGAGGTGGC GGCAGACCGT 
CGCGCCGCGA ACCCCAACGC CATTGCCTAT AACGCCGGGC AGTCCGTCAC CCAGGAGCGC 
CTGGGCCTGG TGTATCGGGG GGATCTGAGC GAAGGGGAGT CCCTGCAGGC GCGGGTGTTC 
CACACCTGGC GCAATTTCGA CAATCGCCTG CCCTTCGAGA GCGGCGGCAT GGTCGGTTAC 
GACCGGGCCT TTTATGGCGC GGGCGTGCAG TACACCCGCG CCAACCGTCT GGGAGACCTG 
CCCGGTCGCG TGACCCTGGG TCTGGACCTG GAGCGCCAGC AGGATGACCG TCGCCGCCAT 
GACAATCTGC TGGGGGTGCG TGGCGATCTG GTCCTCGAAC AGCGCGAGAC CGCCGAGGCC 
GCCGGTGTGT TCCTGCAGCA GGAGATCGAC CTCACGGAGC GGTTGCAGAG CACCCTGGGT 
CTGCGCCGCG ACTGGGTGCG TTTCGCGGTG GATGATCGAT TCCTGAGCGA CGGTGATGAC 
TCGGGAAGTC GCACCTTCCA GGAAACCAGT CATTCCCTGG GCCTGAGCTA CGCCTGGCAT 
CCGCAGCATC GCATCTACGG GACCTACGGC ACCGCCTTCG AGACGCCCAC CTTCACCGAG 
TACGCCAACC CGGCGGGCGG TGGCTTCAAT CCCGCCATCG CACCCCAGCA GGCGCGCAAC 
CTGGAACTGG GCTTCAAGGG ATTCGCGGGA GCGGTGCAGT ACGACCTGGC CGTGTTCAGG 
GTGGACGTGC GCGACGAGCT GGTGCCCTAC GAATTGGATC GTATCTATTA CGAGAACGCC 
GGACGCACCC GGCGCCAGGG TCTGGAGGCG GGCTTGAGCT GGTTCGCCTC GACGGAATGG 
ACATTCACCG GCGCTTGGAC CTGGTCAGAT TTCACCTTCA GGGAGTTCGA GGACGATGGT 
GTGGACCTGG CCGGGCGCGA GCTGCCTGCC ATCCCCCGCC AGCAGCTGTT CCTGGAGGCC 
GCCTGGCGCC CGGGGCGGGA CTACTACATC CTCGACATGC TGGCCCTGGA CCGCCAGTAC 
GCGGACAACG CCAACACCGA GCGGGTGTCC GACACGGCGA TCTTCAACGC CCGCGCCGGC 
CGGGTGTTCC GACAGGATGG TTGGGACGTG GAAACCTTTA TCGCCGTGAA CAACCTGTTC 
GATCAGGACT ATTTCGCCAA CATCCGGCCC AACGCGGCCT TAGGGCGCTA CTACGAGCCA 
GCGCCGGGCA GAAACTTCTT CGTCGGCCTG CACGTGACCC GGCGTTAG 

 

Protein sequence

MVMFPRPYQS ALLCVALSLP LTVAAETQRL EPLTVTAPRL ERPWLDTPAA LGVVEREDLE 
QARQGLQLDE SLVRIPGVTA QNRYNFAQDL RVSMRGFGAR SAFGIRGVKL LVDGIPETTT 
DGQSQVDAID LTALERIEVI RGPSSVLHGN ATGGVLDITT RSGPPETFLQ PRLEAGSFGY 
RRIGVQAGGQ AEDLAWHVSG WDFAMDGYRD HSVAEKRLLH SRLDWDLAAG HRLTALATFL 
DAPRTDDPGA LTAAEVAADR RAANPNAIAY NAGQSVTQER LGLVYRGDLS EGESLQARVF 
HTWRNFDNRL PFESGGMVGY DRAFYGAGVQ YTRANRLGDL PGRVTLGLDL ERQQDDRRRH 
DNLLGVRGDL VLEQRETAEA AGVFLQQEID LTERLQSTLG LRRDWVRFAV DDRFLSDGDD 
SGSRTFQETS HSLGLSYAWH PQHRIYGTYG TAFETPTFTE YANPAGGGFN PAIAPQQARN 
LELGFKGFAG AVQYDLAVFR VDVRDELVPY ELDRIYYENA GRTRRQGLEA GLSWFASTEW 
TFTGAWTWSD FTFREFEDDG VDLAGRELPA IPRQQLFLEA AWRPGRDYYI LDMLALDRQY 
ADNANTERVS DTAIFNARAG RVFRQDGWDV ETFIAVNNLF DQDYFANIRP NAALGRYYEP 
APGRNFFVGL HVTRR