Gene Tgr7_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0233 
Symbol 
ID7316811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp251148 
End bp251558 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID643615118 
Productgeneral secretion pathway protein I 
Protein accessionYP_002512319 
Protein GI220933420 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTT GCCCTCGCCC GAGACGCCCT TACGGACAGC GCGGCTTCAC CCTGCTGGAA 
GTCCTGGTGG CGGTGGTCAT CCTGGCGGTG GCCATGGGCG CGCTCATCAA GGTGGGCAGC 
GAGAATGCCG CCAATGCCGC CTACCTGCGC GACCGTACCC ACGCCCACTG GGTGGGCATG 
AATCTGCTCA CCCGCTACCG CATCGGCATG GAACCCCGGC AGATCGGCAG TCGCGAAGGG 
ACGAGCGAGA TGGGCGAGCG CACCTGGTAC TGGCGGGCCA CCGTCAGCGA GGCCAGCGTG 
GACGTGGAAG GCGTGACCCT GGGCGGCCTG GTGCGGGTGG AGGTGGAGGT GCGCGATCGG 
GACGACCGCG ACCGGGAGCC GTTGGCGCGG GTGGTTGGGT TCATTTTATG A
 
Protein sequence
MILCPRPRRP YGQRGFTLLE VLVAVVILAV AMGALIKVGS ENAANAAYLR DRTHAHWVGM 
NLLTRYRIGM EPRQIGSREG TSEMGERTWY WRATVSEASV DVEGVTLGGL VRVEVEVRDR 
DDRDREPLAR VVGFIL