Gene Tgr7_0231 details

Gene Information

• Locus tag: Tgr7_0231
• ID: 7316809
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 250141
• End bp: 250590
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643615116
• Product: general secretion pathway protein G
• Protein accession: YP_002512317
• Protein GI: 220933418
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTACA GCATCGCACA CAAATCCCGC CGCATGGGCG GCTTCACCCT CATTGAGGTC 
ATGGTGGTGG TGGTCATTCT CGGCATTCTG GCCGCCATCG TGGTGCCGCG CATCATGGAC 
CGGCCCGACG AGGCCCGCAT CGCCAAGGCG CGCAACGACA TCCGCACGCT GGAACAGGCC 
CTGAACCTCT ACCGACTGGA CAACTTCCGC TATCCCACCA CCGAGCAGGG CCTGCGCGCC 
CTGGTGGAAC GACCCACCAC CTCCCCCGAG CCGCGCAACT GGCGTGCCGG AGGCTACCTG 
GACCGCCTGC CCATGGATCC CTGGGGCAAC CCCTACGAAT ATGCCCATCC CGGTCGCCAT 
GGCGACATCG ACATCTACAG CCTCGGCGCC GACGGCCGTC CCGGTGGTGA CGGTGCGGAT 
GCCGACATCG GTAACTGGAA CATCAACTGA 

 

Protein sequence

MNYSIAHKSR RMGGFTLIEV MVVVVILGIL AAIVVPRIMD RPDEARIAKA RNDIRTLEQA 
LNLYRLDNFR YPTTEQGLRA LVERPTTSPE PRNWRAGGYL DRLPMDPWGN PYEYAHPGRH 
GDIDIYSLGA DGRPGGDGAD ADIGNWNIN