| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0224 |
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| Symbol | |
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| ID | 7316802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 241788 |
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| End bp | 242696 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643615109 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_002512310 |
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| Protein GI | 220933411 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGG CGCAGCTGCC CCTGGGGCTG GCGACCCGTT TCCAGGAACG GGTGAATGTC
ACGCGCCTGG CGGGCTGGGT GACCGTGTTT CTGATCCTGC TGCTGGCCTA TGCCCTGGCC
CGCCTGACCT GGGCCCTGCT GGCGCCTGCG CCCCTGGTAT TGCCGGCGCC GATGGTGGCG
CCCGCCCAGG TGGCCGCGAC GGGCAGCGCC GAGTCGCCTG CGGCCTCGGC CCTGGCCCGG
GTGGCGGGCT TGCACCTGTT CGGCCAGGCC GAGGTGCGAG AAGAGGATGC CGTGGCGGTA
CCTGTGGATA CGCCGGATAC GCGCCTGAAT CTCAGCCTCA AGGGCGTGGT GGCCGCCACG
CCGGTGGAAC GGGGGCTGGC GCTGATCGCC GATGAGCGCG GCAATGAACG ACATTACGCC
GTGGGCGCGG AGTTGCCCGG CGGCGCGACC CTGGAGCAGG TGCACGGGGA CCGGGTGGTG
CTGCGGCGGG CCGGGCGTTT CGAACAATTG AGGTTGCCCC GGGACGCGCC CCTGTCCGGC
GAGGCGCCGG CGGTCCTGGT GCCGGAGCCC ATGGCACAGC CCGGCGTTCA GCCGGGTTCG
ATCTCCGAGG ACACCCGGCA GCAGTGGCTT CAGGATCCGC GCACCCTGTT CGACATGGTG
CAGGCCCAGC CGGTGATGCA GGATGGTTCG ATCCGGGGCT TTGCCATTTC CCCGCGCCGG
GACGCGCGGG CGTTCCGCCA GGCGGGTTTG CGCCCGGGAG ACGTGGTCAC CTCCATCAAC
GGCGTGACCA TCGCCGGCAT GACCGATCCG GCGGCGATGA TGGAACAACT GGCCGGCGCC
ACCGAGCTGC GGCTGGATAT CGAACGCAAC GGACGTCCGG AGTCCGTGGT CATACAGGTG
GGGCCGTGA
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| Protein sequence | MSLAQLPLGL ATRFQERVNV TRLAGWVTVF LILLLAYALA RLTWALLAPA PLVLPAPMVA
PAQVAATGSA ESPAASALAR VAGLHLFGQA EVREEDAVAV PVDTPDTRLN LSLKGVVAAT
PVERGLALIA DERGNERHYA VGAELPGGAT LEQVHGDRVV LRRAGRFEQL RLPRDAPLSG
EAPAVLVPEP MAQPGVQPGS ISEDTRQQWL QDPRTLFDMV QAQPVMQDGS IRGFAISPRR
DARAFRQAGL RPGDVVTSIN GVTIAGMTDP AAMMEQLAGA TELRLDIERN GRPESVVIQV
GP
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