| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0199 |
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| Symbol | |
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| ID | 7316777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 217816 |
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| End bp | 220020 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643615084 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002512285 |
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| Protein GI | 220933386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.779269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCTG CGCTGAAAAG GCTTTCCCTG GGCCTGCTGC CCATGGCAGT GATCTTCCTG
CTGCTGCTCG CCTCGCTGTT TGTCATGGGC GATGCGGCAC GCAACTCCGC GCGCTTCGAA
CGTCTCTACA TCTGGCTGCT GCTGCTCAAC ACCCTGGGCC TGGTGTTCCT GGCGGTGCTC
ATCGGCACCA AGGTCTACCA GGCGGTGGCC CAGCTGCTGC GCGGCGAGCC CGGCTCGCGC
CTGACACTCA AGCTGGTGCT GCTGTTCGTG GTGCTCTCCC TGGCCCCGGC CGGGGTGGTC
TACTACTTCT CCATGAAGTT CCTGGACGAG GGTATCGACA GCTGGTTCGA CGTGCGCGTG
GAAAAGGCCC TGGAGGACGC CCTGGAACTG TCGCGCAGCT CCCTGGACCT GCGCATGCGC
CAGCTCACCC GCCAGACGGA ATCCCTGGCC GAGGAGACCG TGGACCTCGC TGAGGGGCTT
GCGGCATTCA CTCTCAATGA TCTGCGCAAC CGGGGCGGCG CTGCGGAGCT GACCCTGATC
GACAGCAACA ACCGCATCAT CGCCTCGAGC ATCGGCGACA CCCTGCGCCG GCTGCCCAGT
CTACCCAGCC AGGAGGTGTT CCTGGTGCTC GCCCAGCGCC AGAACTACGT GGCCCTGGAG
CCGGTGTACG ACACCGGCCT GTACATCCGC GTGGTGGTTC CGGTGCGCGC CCGCAGTCCC
GCCGACGAGG GACGCATCCT GCAGGCCATC TACCCGGTGG AGGCGCGCAT GAGCCAGCTC
GCCGACAGCG TCCAGGACGC CTTCTCCGAG TACAAGGAAT TCGCCTACCT GCGCGCGCCG
CTCAAGCAGA GCTTCGCTAT CACCCTGTCC CTGGCCCTGC TGGTGTCCGT GCTGGGCGCC
ATCTGGGCGG CGTTCTATTC CGCCGGGCGC ATGGTGGCGC CGATCCGTGA ACTGGCCGAG
GGCACGCGCC TGGTGGCGGC CGGCGAATAC CGCAAGAAGC TGCCGGTGAA CCAGCGCGAC
GAGCTGGGAT TCCTGGTGCG CTCGTTCAAT GCCATGACCG CGACCCTGGC CGCCACCCGG
GACGAGGCCG AGCGCAGCCG GCGCCTGGCC GAGGGGCGGC GCACCTACCT GGAGACCGTG
CTGCAACATT TGTCATCCGG CGTTGTTACC CTGGATCGGG ACATGATGCT GCGCACTGCC
AATACCGCCG CGAGCCAGAT CCTGGAGGTG GACCTGACCC GGGAGTCCGG GCGCAGTCTG
GGTGACATCG GCCGGCATCA TGCCCAGGTG CAGCGTTTCC TGGACGAGAT CGACACCCAG
CTGCGGCAGC AGCAGGACGA ATGGCAGGCC CAGATCACCG TGTTCGGCGC CGCAGGGCGC
AAGGTGCTCA TGTGCCGGGG TGTGAAACTG CCCCCGGAAA GCGGCATGCG CGGTGGTCAG
GTGGTGGTGT TCGACGACGT CACCGCCCTG TTGCAGGCCC AGCGGGATGC CGCCTGGGGC
GAGGTGGCGC GGCGCCTGGC CCACGAGATC AAGAACCCGC TCACCCCGAT CCAGCTCTCC
GCCGAGCGCC TGCAGCGCAA GCTCAAGCCC AGCCTTCCGG AAGATGAGGC CCGTGTCCTG
GAGCGTTCCA CCCACACCAT CGTGCAGCAG GTGGAGGCCA TGAAATCCAT GGTCAATGCC
TTCAGCGAAT ACGCCCACAC ACCAGCGGTG TCGGTGGAGC CCCTGGATCT CAACGACCTG
GTGCGCGAGG TGGCGGATCT TTACGCCGGC GTGGGCCAGC GTTTGCGCCT GCACCTGGCC
GACAGGCTCC CGCCGGTGCT GGCCGATGCC GGGCGCATGC GCCAGCTGCT GCACAACCTG
ATCAAGAACG GTCTCGAGGC CCTGGAAGGG GTGCCCGAGC CGCGCCTGGA GGTCGATACC
CGCTGTGTGC GCGAGGCGCG CTGCACGGTG GTGGAGCTGC GCGTGCAGGA CAACGGCCGC
GGCGTGCCCG AGGACTTCAT GTCCCGGCTG TTCGAACCCT ACGTGACCAG CAAGCCCAAG
GGCACCGGGC TCGGGCTTGC CATCGTCAAG AAGATCGTCG AGGAACACAA CGGCATGGTC
TGGGCCGAGA ACCGCGCCAG CGGCGGCGCC CGCATCGTGA TCCGCCTGCC GGCCAGCGTG
CCGGTGGCCG GCTCCCACCA GGACCTGCAA GAGGAGATCG CATGA
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| Protein sequence | MVAALKRLSL GLLPMAVIFL LLLASLFVMG DAARNSARFE RLYIWLLLLN TLGLVFLAVL
IGTKVYQAVA QLLRGEPGSR LTLKLVLLFV VLSLAPAGVV YYFSMKFLDE GIDSWFDVRV
EKALEDALEL SRSSLDLRMR QLTRQTESLA EETVDLAEGL AAFTLNDLRN RGGAAELTLI
DSNNRIIASS IGDTLRRLPS LPSQEVFLVL AQRQNYVALE PVYDTGLYIR VVVPVRARSP
ADEGRILQAI YPVEARMSQL ADSVQDAFSE YKEFAYLRAP LKQSFAITLS LALLVSVLGA
IWAAFYSAGR MVAPIRELAE GTRLVAAGEY RKKLPVNQRD ELGFLVRSFN AMTATLAATR
DEAERSRRLA EGRRTYLETV LQHLSSGVVT LDRDMMLRTA NTAASQILEV DLTRESGRSL
GDIGRHHAQV QRFLDEIDTQ LRQQQDEWQA QITVFGAAGR KVLMCRGVKL PPESGMRGGQ
VVVFDDVTAL LQAQRDAAWG EVARRLAHEI KNPLTPIQLS AERLQRKLKP SLPEDEARVL
ERSTHTIVQQ VEAMKSMVNA FSEYAHTPAV SVEPLDLNDL VREVADLYAG VGQRLRLHLA
DRLPPVLADA GRMRQLLHNL IKNGLEALEG VPEPRLEVDT RCVREARCTV VELRVQDNGR
GVPEDFMSRL FEPYVTSKPK GTGLGLAIVK KIVEEHNGMV WAENRASGGA RIVIRLPASV
PVAGSHQDLQ EEIA
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