| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0197 |
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| Symbol | |
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| ID | 7316775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 215952 |
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| End bp | 217250 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643615082 |
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| Product | sun protein |
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| Protein accession | YP_002512283 |
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| Protein GI | 220933384 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.404032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCCCC GCCAGATCAC CCTCAAGGCC CTCAAGCGTG TCGTCATCAA CGGCGCCTCC
CTCTCCGACG TGCTGCCGCC GCTGCTGGCG CCGCTGGCGC CCCGGGACCG GGCCTTTGCC
CAGGCCCTGG CCTTCGCCAC CTTGCGCTGG CACCACCGGC TCGAGGCACT GACCGGGCGC
CTGCTGAGCA AGCCCATGCG CGACAAGGAC CGGGACGTGG GGCTGGTGAT CGAGATGGGA
CTGTGCGAAC TGCTCTACCT GCGCACGCCG GACTATGCCG CCATCCAGGA GACCGCCGGA
CTGGCGAAGA GCCTGGGCAA GCCCTGGGCG ACCGGGGTGG TCAACGCCGT GCTGCGCCGG
GTGCAGCGGG AGGGGGATGC CCTGCTGGCC GATCTGGATC GGGACCCGGC CCTGCGTCTG
TCCCTGCCGG ACTGGTTGCT GGGGGCGCTC AGGAAGGCCT GGCCCGAGGA CTGGCAGGCG
CTGGGCGAGG CCCTCAACGC GCAGGCCCCC ATGACCCTGC GGGTCGATCT GTCCCGCATC
ACCCGGGAGG CCTACCGGGT GCGCCTGGCC GAAGCGGGAC ATGACGCTGA GCCCCATCCC
GTGGCCGCCT CGGCCCTGGT GCTGGCGGCA CCGGTGGACG TGAACCAGCT GCCGGGCTTC
GACGCGGGGC TGGTCTCGGT ACAGGACGCG GCGGCGCAGC TGGCGGCACC GCTGCTGGAT
TGTCGGCCGG GTATGCGGGT GCTGGACGCC TGCGCGGCGC CCGGTGGCAA GACCCTGCAC
CTGCTGGAGT CGGTGGCCGG CGATCTGGAT CTCACCGCCC TGGATGTGGA TGCCGAGCGC
CTGAGGCGGG TGGAGGAGAA TCTCGCCCGG GCCGGACGCC GGGCGCGGCT GGTGGCCGGA
GACGGCGAGC ATCCGGCGCA ATGGCACGAG GGCGGCGCCT ACGATCGCAT CCTGCTGGAT
GCCCCTTGCT CCGCCACCGG CGTGATCCGG CGTCATCCGG ACATCAAGCT GCTGCGCAAG
GGTGAAGACA TTCCCAGGCT CGCGGCCCGC CAGGCGGCCC TGCTGGAAGC GCTCTGGCCC
CTGCTGGCCC CGGGGGGTAT GCTCTTGTAT GCCACCTGCT CGCTGCTGCC CCGGGAAAAT
GCCGATCAGG TGCGCGTCTT TCTGCAGGCC CACGGGGATG CCGAAGAGAG CCCGTTGCCC
GAAGACTTTG GCCGCAGTAC CTCGCCGGGG CGGCAGATAC TCGCCGGAGA ACAGGGCATG
GACGGCTTCT ACTACGCCAG GCTGATTAAA CAGACTTGA
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| Protein sequence | MSPRQITLKA LKRVVINGAS LSDVLPPLLA PLAPRDRAFA QALAFATLRW HHRLEALTGR
LLSKPMRDKD RDVGLVIEMG LCELLYLRTP DYAAIQETAG LAKSLGKPWA TGVVNAVLRR
VQREGDALLA DLDRDPALRL SLPDWLLGAL RKAWPEDWQA LGEALNAQAP MTLRVDLSRI
TREAYRVRLA EAGHDAEPHP VAASALVLAA PVDVNQLPGF DAGLVSVQDA AAQLAAPLLD
CRPGMRVLDA CAAPGGKTLH LLESVAGDLD LTALDVDAER LRRVEENLAR AGRRARLVAG
DGEHPAQWHE GGAYDRILLD APCSATGVIR RHPDIKLLRK GEDIPRLAAR QAALLEALWP
LLAPGGMLLY ATCSLLPREN ADQVRVFLQA HGDAEESPLP EDFGRSTSPG RQILAGEQGM
DGFYYARLIK QT
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