| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0191 |
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| Symbol | |
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| ID | 7315700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 208661 |
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| End bp | 211132 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615076 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002512277 |
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| Protein GI | 220933378 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC ACCTGGTCAT CGTCGAATCC CCCGCCAAGG CCAAGACCAT CAAGAAATAC
CTCGGACCCG ATTTCGAGGT GATGGCGTCC TATGGCCATG TGCGCGACCT GGTCCCCAAG
GAAGGCGCCG TGGACCCGGA TCACGGCTTT CGCATGAACT ACCAGGTGAT CGACCGCAAC
GAGCGGCACG TGGAAAGCAT CGTCAAGGCC CTGCGCAAGG CCGACTCCCT GCTGCTGGCC
ACTGACCCTG ACCGCGAGGG TGAGGCCATC TCCTGGCACC TCTACGAGCT GCTCCGGGAA
CGGGGCGTGC TGGACGCCAA GACCGTGCAG CGGGTGGTGT TCTACGAGAT CACCCAGCGC
GCCGTGAAGG AGGCCATCGA GCAGCCCCGC GGCCTGTCCT TCGACCTGAT CAACGCCCAG
CAGGCGCGCC GCGCCCTGGA CTACCTGGTG GGCTTCAAGC TCTCTCCGCT GCTGTGGAAG
AAGATCAAGC GCGGCCTGTC CGCCGGCCGT GTGCAGAGCC CCGCCCTGCG CATGATCGTG
GAGCGCGAGG AAGAGATCGA ACGCTTCCAG ACCCGCGAGT ACTGGACCCT CGAGGCGGAC
CTCGACAAGT CCGGCCAGGC CTTCAACGCC AAGCTGCACA CCCTGGACGG CAAAAAGCTC
GACCAGTTCG ACATCGCCGA CGAGGTCACC GCCAGCGCCG CCCGCAACAC CCTGCTGTCC
GCCGCCGACG GCAGGCTGCG CGTGGCGCGC ATCGAGAAGA AACAGCGCCG GCGCAACCCG
GCGCCGCCGT TCACCACCTC TACCCTGCAA CAGGAGGCGG TGCGCAAGCT GGGCTTCTCT
GCCAGCCGCG CCATGCGCGT GGCACAGCAG CTCTACGAGG GCATCGACCT GGGCGCCGGA
CCCATCGGCC TGATCACCTA CATGCGTACC GACTCGGTGA CCCTGGCCGG CGAGGCCATC
GCCGAGATCC GCAGGCTGAT CGAGCAGCGC TACGGCCGCA ACACACTCCC CGAGCACCCG
CGCCAGTACA AGACCAAGGC CAAGAACGCC CAGGAGGCCC ACGAGGCCGT CCGCCCCACC
TCGGTGATGC GCGCCCCCGA GGAGGTCAAG CGCCACCTGA CCACAGACCA GTTCAAGCTT
TACGACCTGA TCTGGAAGCG CACCGTGGCC TGCCAGATGC AGCATGCCAC CCTGGACACC
GTGTCCGCGG ACCTCGCCGC CGGCAGCGAA CGCCACCTGT TCCGCGCCTC CGGCTCCTCG
GTACGCGACC CCGGCTTCAT GGCCGTCTAC CAGGAGGGCA AGGACGACGC CAAGGAAGAA
AGCGACGAGC GCATCCTGCC ACCGCTCGAG GAAGGCGACA TCGTCAAGCT CGAGGCCCTG
CGTGCCGAAC AGCACTTCAC AGAACCGCCG CCCCGCTACA CCGAGGCCAG CCTGGTGAAG
GCCCTGGAGG AATACGGCAT CGGCCGCCCC TCCACCTACG CCAGCATCAT CTCCACCCTG
CAACAGCGGG AATATGTGGA GATGGACAGC CGGCGCTTCA TCCCCACCGA CATCGGGCGC
ATCGTCAACG CCTTCCTGAC CCAGCACTTC ACCCAGTACG TGGACTACGA CTTCACCGCC
CGCCTGGAAG ACGAGTTGGA CGAGATCTCC CGCGGCGAGA AGGAATGGGT GCCGGTGATG
GAGGGATTCT GGTCCTCCTT CAAGGAACAG ATCGAGGAGA AGGAAGCCAC CGTGACCCGC
GCCGAGGCGG TGCAGTCCCG GGAACTGGGC ATCGACCCCA AGAGCGGGCG ACCGGTGAGC
GTGCGCATGG GCCGTTACGG ACCCGTGGTG CAGATCGGCA CCAAGGACGA CGAGGAGAAG
CCCCGCTTCG CCGGCCTGCC GCCGGGCAAG AAGATGGACG CGGTCACCCT GGAAGAGGCC
CTGGAGCTGT TCAAGCTACC CCGGGAGCTG GGCGAGACCC CGGAAGGGGA GCCGGTGTCG
GTCAACATCG GCCGTTTCGG CCCCTACGTG AAGTTCGGCA GCCGCTACGC CTCCCTCAAG
CCCGAGGACG ACCCCTTCAG TATCGAACTG CCCCGTGCCC TGGAGCTGGT GGCCGAGAAG
AAGGAAGCGG ATGCCAACAA GTACATCCGG GTGTTCGACG AGGCGGGCGT ACAGGTGGTC
AACGGCCGCT ACGGCCCCTA CATCACCGAC GGCAACAAGA ACGCGCGCAT CCCCAAGGAT
CGTGATCCCA AGAGCCTGAC CCTGGAAGAA TGCCAGGCGC TGCTCGCCGC CGCCCCCGAA
CGCAAGGGCC GGCGCGGCGT GAAGAAAGCG GCGCCGAAGA AAAAGGCCGC GGCGCCCAAG
AAGGCCGCCC CGAAGAAGAA AGCGGCGCCC AGGAAAAAGG CGACCGCCAA GAAGAAAGCC
GCACCCAAGA AGGCCGCCGC GAAGAAAAAC GCCACTTCCG GTGGCGAGTC CGGGGCCGGG
TTGACCCGCT AA
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| Protein sequence | MSKHLVIVES PAKAKTIKKY LGPDFEVMAS YGHVRDLVPK EGAVDPDHGF RMNYQVIDRN
ERHVESIVKA LRKADSLLLA TDPDREGEAI SWHLYELLRE RGVLDAKTVQ RVVFYEITQR
AVKEAIEQPR GLSFDLINAQ QARRALDYLV GFKLSPLLWK KIKRGLSAGR VQSPALRMIV
EREEEIERFQ TREYWTLEAD LDKSGQAFNA KLHTLDGKKL DQFDIADEVT ASAARNTLLS
AADGRLRVAR IEKKQRRRNP APPFTTSTLQ QEAVRKLGFS ASRAMRVAQQ LYEGIDLGAG
PIGLITYMRT DSVTLAGEAI AEIRRLIEQR YGRNTLPEHP RQYKTKAKNA QEAHEAVRPT
SVMRAPEEVK RHLTTDQFKL YDLIWKRTVA CQMQHATLDT VSADLAAGSE RHLFRASGSS
VRDPGFMAVY QEGKDDAKEE SDERILPPLE EGDIVKLEAL RAEQHFTEPP PRYTEASLVK
ALEEYGIGRP STYASIISTL QQREYVEMDS RRFIPTDIGR IVNAFLTQHF TQYVDYDFTA
RLEDELDEIS RGEKEWVPVM EGFWSSFKEQ IEEKEATVTR AEAVQSRELG IDPKSGRPVS
VRMGRYGPVV QIGTKDDEEK PRFAGLPPGK KMDAVTLEEA LELFKLPREL GETPEGEPVS
VNIGRFGPYV KFGSRYASLK PEDDPFSIEL PRALELVAEK KEADANKYIR VFDEAGVQVV
NGRYGPYITD GNKNARIPKD RDPKSLTLEE CQALLAAAPE RKGRRGVKKA APKKKAAAPK
KAAPKKKAAP RKKATAKKKA APKKAAAKKN ATSGGESGAG LTR
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