Gene Tgr7_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0186 
Symbol 
ID7316763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp204882 
End bp205796 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID643615071 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002512272 
Protein GI220933373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCG TCCTGGAATA TCTCGAAGGC GTCCAATGGG AAGAGCTGAT CTTCTCCACC 
CTGCGCATCC TGCTCATCCT GGTCATGGCC TGGGTGATCA TGAGCGTGGT CCGGGGCGGT
CTGGCCCGCA TGGAGAGAAA GCTGGTGGAG TCGGGCAAGA AGCAGGGCGA CGTGCCCTCG
GAGGCCACCA AGCGCGCCGA GACCCTGGTG CGGCTGTTGC GCCAGCTGGT GCTCATCGTG
GTCTGGGTGA TGGCCTTGCT GGTGATCCTC AACGAGCTGG GCGTCTCCGT GGCCCCCATC
CTGGCCTCGG CCGGTGTGCT GGGCCTTGCC ATCGGCTTCG GCGCCCAGAA CCTGGTGCGG
GACGTGATCA GCGGCTTCTT CTTCATCCTG GAGAACCAGG TGCGCGTGGG CGACGTGGTG
GTGGTCAACG GCACCGGCGG GCTGGTGGAG TCCATCAACT TCCGTACCCT GGTGCTGCGC
GACCTGGAGG GCAAGGTGCA CATCTTTCCC AACGGCACCA TCGACGCGGT CACCAACCTG
ACCCGGGAGT GGTCCGCCTA CGTGTTCGAC ATCGGCGTGG CCTACAAGGA GGACACCGAC
AAGGTGGTGG GCATCCTCAG GGACGTGGGT GAGGAGATCA AGGCCGACGC CGACTACGGT
CCCAACATCC AGGACATCGA GATCTTCGGC GTGGACAAGT TCGACGACTC CGCCGTGGTC
ATCAAGGGGC GCATCAAGAC CCTGCCCATC AAGCAGTGGT ACGTGGGCCG TGAGTTCCTG
CGTCGGGTGA AGTATGCGTT CGATGCCCAG GGTGTGGAGA TCCCGTTCCC GCACCGTACC
CTGTACTTCG GCGAGGCCAG CCCGCCCATC CTGGCCAGGA TGGTCAATCA GGAAGCGGGC
AAGGCTCAAA GCTAG
 
Protein sequence
MELVLEYLEG VQWEELIFST LRILLILVMA WVIMSVVRGG LARMERKLVE SGKKQGDVPS 
EATKRAETLV RLLRQLVLIV VWVMALLVIL NELGVSVAPI LASAGVLGLA IGFGAQNLVR
DVISGFFFIL ENQVRVGDVV VVNGTGGLVE SINFRTLVLR DLEGKVHIFP NGTIDAVTNL
TREWSAYVFD IGVAYKEDTD KVVGILRDVG EEIKADADYG PNIQDIEIFG VDKFDDSAVV
IKGRIKTLPI KQWYVGREFL RRVKYAFDAQ GVEIPFPHRT LYFGEASPPI LARMVNQEAG
KAQS