| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0171 |
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| Symbol | |
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| ID | 7316748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 184786 |
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| End bp | 187212 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643615056 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002512257 |
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| Protein GI | 220933358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000289521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA GCAACGACAA CCTGCGCTTC CGGCTGATCT TCGAGCAGGC CCTGGATCCC
ATGGTCCTGA TCGACCGGCA TGGCGGCATC GTCGAGGCCA ATCGCAGTGC CTGCGCCAGC
CTCGGCTACA GCCACGAGGA GCTGGTGGGC GGACTGCACG TCACCGACTT CGACCTGAAC
GCCACCCGCG AGGATGTGGG CCGGGTGCAC GGCAACCCGG AACGGCACCT GCCCGCCAGC
TTCCAGAGTA CCTACCGGCG CAAGGACGGC AGCACCTTCC CGGCGGAGGT GCACATCAAT
GCCGTCCGGG TGGGCGAGCA GGCGCAGGTC TTTGCCACCT TCCTGGACAT CAGTGAGCGC
CTGGCCGCGG AGCGCACCCT GCGCGAGCGG GAACACCAGC TGCGTACCGC CATCACCAGC
GCGCCCATGG TGCTGTTTTC CCTGGACCGG CACGGCAATT TCATGCTCTC CGAGGGCAAG
GGTCTGGAGG GCCTGGGGCT TGTCCCCGGG CAGGCGGTGG GCATGAACGC CCTGGAGATG
TACGGCGCCT ACCCGGAGGT GGCCGAGGGG CTGCGGCGGG CCCTGTCGGG CGAGCCGGTG
CAGCTGGAAA GCCGGGTGGA GGGGCGCTGC TTCCTGCACC ACTGGCAGCC CGTGCCGGAT
GAAGCGGCGG GTGGCTGGGG CGTGCTGGGG GTCTCCTACG ACATCACCGC CCAGTGCCTC
GCCGAGCAGG CACTCAGCGG CGAGCGCGAC CGGCTGTTCA CCACCCTGGA GTCCATCGCC
GACGGCGTGA TCACCGCAGA CGTGGCCGGT CGGGTGGCCT ACATGAATCC GGTGGCGGAA
CAGCTCACCG GCTTCACCCT GAACCAGGCC CGCGGCCGCC CCATGGAGGA GATCCTGCGG
GTGGAGGATC TGGAGAGCGG CGAACTGTTG CCCGATCCCG TGGAACGTTG TTTCAACGGC
GGCAGCCCGG TGGTGTTCAG CGAGGAGAGC CGGCTGCGCC GCCCGGACGG CGAGAGCTAC
GCCGTGCGCC TGACGGCCTC GCCCCTGCGG GACGGGGAGG ACGGCATCAG CGGCGCGGTG
CTGGTGCTGC ATGACTTCAG CATGCTCTGG GACATGGCCC GGCAGCTGAG TCACCAGGCC
CGTCATGACG CCCTCACCGG GCTGATCAAC CGGCGCGAGT TCGAGGACCG GGTGCGCGAG
GCCCTGGAGA GCGCCCGGCG CAGCAGTCGA AGCCACGCCC TCTGCTACAT CGATCTCGAC
CAGTTCAAGG TGGTCAACGA CACCTGCGGG CACGTGGCCG GCGACGAGCT GCTGCGCCAG
CTGGCCGCCG CCCTGCCCCG CCACATCCGC GACACCGACA CCCTGGCCCG CCTGGGCGGC
GACGAGTTCG GTCTGCTGCT GGAAAACTGC CCCCTGGACC GCGCCCTGAG CATCTGTCAC
CAACTGCTGG CGGAGGTGGC CGAGCTGCGT TTCATGTGGC AAGGGCGGCG TTTCGACGTG
GGCATGAGCA TCGGCCTGGT AGCCATCGAC GGGGCCAGCG CCTCCCTCTC GGAGGTGCTG
AGCGAGGCGG ATTCCGCCTG CTACGTGGCC AAGGAACAGG GCCGCAACCG GGTCTATGTC
TCCCGTCCCG GGGACCAGGC CCTCAAGACC CGCTTCGGCG AGATGGAATG GCTGGGCCGC
ATCCGCGAGG CCATGGAGGA GGAGCGTTTC GAACTCTACT GCCAGCCGAT CCGGCCGATC
TCCGGGGAGG GTGTGCCCCA CTTCGAGATC CTGCTGCGGC TCAAGGCCGA GGACGGCAGC
CTGGTGGAGC CGGGGGCATT CATCCCGGCG GCGGAACGCT ACAACCTCAT GCCCCAGGTG
GACCGGCACG TGATCCGCTC GGTGTTTGCC ATGCTGGCGG ATTCGGACTT CGCCCTGAAG
CAGCATGCCA TCGTGGGTAT CAACCTCTCC GGCCAGTCCC TGGGCCAGGA GGATCTGCTC
GACTTCGTCA CCGAGGCGCT GCACTACTAC GGCCTGCCCG CCCACCGCTT CTGTTTCGAG
ATCACCGAGA CCGCGGCCAT CGCCAATCTC TCCAGTGCCG CCGGTTTCAT CCGCGAACTG
CGCGACATGG GCTGCGCCTT CGCCCTGGAT GATTTCGGTA GCGGACTGTC CTCGTTCAAC
TATCTCAAGC ACATGCCCGT GGACTACCTG AAGATCGATG GCAGCTTCGT GCAGGACGTG
CTGACCGACC CGGTGGATGC CGCCATGGTC GGCGCCATTC ACCGCATCGG CCGCGTGCTG
GGGGTCAAGA CCATCGCGGA ATTCGTGGAA TCCGAAGCGG TGCTCGAACA CCTGCGCGAG
ATCGGCGTGG ACTACGCCCA GGGCTACGGC ATCGGCCGGC CGAAGCCTTT CCGAGATTGC
AGCCTGTTTC AAACTGGCCG GGATTAA
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| Protein sequence | MPASNDNLRF RLIFEQALDP MVLIDRHGGI VEANRSACAS LGYSHEELVG GLHVTDFDLN
ATREDVGRVH GNPERHLPAS FQSTYRRKDG STFPAEVHIN AVRVGEQAQV FATFLDISER
LAAERTLRER EHQLRTAITS APMVLFSLDR HGNFMLSEGK GLEGLGLVPG QAVGMNALEM
YGAYPEVAEG LRRALSGEPV QLESRVEGRC FLHHWQPVPD EAAGGWGVLG VSYDITAQCL
AEQALSGERD RLFTTLESIA DGVITADVAG RVAYMNPVAE QLTGFTLNQA RGRPMEEILR
VEDLESGELL PDPVERCFNG GSPVVFSEES RLRRPDGESY AVRLTASPLR DGEDGISGAV
LVLHDFSMLW DMARQLSHQA RHDALTGLIN RREFEDRVRE ALESARRSSR SHALCYIDLD
QFKVVNDTCG HVAGDELLRQ LAAALPRHIR DTDTLARLGG DEFGLLLENC PLDRALSICH
QLLAEVAELR FMWQGRRFDV GMSIGLVAID GASASLSEVL SEADSACYVA KEQGRNRVYV
SRPGDQALKT RFGEMEWLGR IREAMEEERF ELYCQPIRPI SGEGVPHFEI LLRLKAEDGS
LVEPGAFIPA AERYNLMPQV DRHVIRSVFA MLADSDFALK QHAIVGINLS GQSLGQEDLL
DFVTEALHYY GLPAHRFCFE ITETAAIANL SSAAGFIREL RDMGCAFALD DFGSGLSSFN
YLKHMPVDYL KIDGSFVQDV LTDPVDAAMV GAIHRIGRVL GVKTIAEFVE SEAVLEHLRE
IGVDYAQGYG IGRPKPFRDC SLFQTGRD
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