Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0156 |
Symbol | |
ID | 7316162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 168851 |
End bp | 173281 |
Gene Length | 4431 bp |
Protein Length | 1476 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643615041 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_002512242 |
Protein GI | 220933343 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTCCC GCCCCACCCA CACCTGGTTC AGCGACAACT TCACCGAACC CACCCCCGTG CAGCGGGAGG GCTGGGCGCG CATCGCGGCC GGTGACCACG CCCTGCTGGT GGCCCCCACC GGCAGCGGCA AGACACTCGC CGCCTTCCTC GCCGGCATCG ACCGGCTCAT GCAGGAGGCC GACGATGCGA AAGCGGGCGT GCGCGTGCTC TACGTCTCGC CGCTGAAGGC CCTGGTCTAC GACGTGGAGC GCAACCTGCG CGCGCCGCTC ACCGGCATCC TGCGCACCGC CGAGCGCCTG GGCGAACCGG CGCGCAGCCT GCGCGTGGAC ATGCGCACCG GCGACACGCC CCAGGCCGAG CGCCGGGCGC AGCTCAAGGA CCCGGCCCAG ATCCTGGTCA CCACCCCCGA ATCCCTGTTC CTGCTGCTGG GCTCGAAGGC CCGGGAGAAC CTGCGCACGG TGCACACGGT GATCGTGGAC GAGGTGCATG CCCTGGCCCC CAGCAAGCGC GGCGCCCATC TGGCCCTGTC CCTGGAACGT CTCGCGGAGA TCACCGACGC CGAACCCCAG CGCATTGGTC TCTCCGCCAC CGTGAACCCG CCGGAGCTGG CCGCCCGCTT CCTGGGCGGC GACCGCGAGG TGGCCATCGT CGACACCTCC GCGAAACCCG CCCTGGACCT GCACGTGGAG GTGCCCGTGG CGGACATGGA GGCCGTACAG TCGCCCGCCA CCACCACACC CCCGGGCCCG AAGCGGGGCG GCTCCATCCT GGGCGAGCTC TACGCCCGGG AGGTGGCCAG GCCCACCCCC GAGCGGGGCA TCTGGCCCGC CATGTACCCG GCGCTGGTGG CGGCCATCCG CAGCCATCGC TCCACCCTCA TCTTCGTCAA CAGCCGGGGC CTGGCCGAAC GACTGACCCA AAGACTCAAT GAAGTCGCCG ACGAACCCCT GGTCCTCGCC CACCACGGCA GTGTCTCCCA CGAGCGCCGC GCCGAGATCG AGGAGGGTCT CAAGGCGGGT CGCCTCAAGG GCATCGTCGC CACCAGTTCG CTGGAACTGG GCGTGGACAT GGGCGCGGTG GATCTGGTCA TCCTGGTGGA GTCCCCCGGC AGCGTCGCCC GGGGCCTGCA ACGGGTGGGC CGCGCCGGGC ACCAGGTGGG CGCGGTGAGC CGCGGGCTCA TCTACCCCAA GTTCCGGGGC GACCTGCTGG AATGCGCCGT GGTGAGCGAG GCCATGCTGG AGGGTCTGCT CGAACCCATC AGCGTGCCCC GCAATCCCCT GGACGTGCTG GCCCAGCAAC TGGTGGCCAT GGTCTGCGAC ACGCCGCGCA CGGTGAGCGA ACTGGAGGCC CTGGTGCGCC GCACCCACCC CTACCGGGAG CTGTCCCGGC CGCTGCTGGA AGGGGTGCTT GACATGCTCT CCGGCCACTA CCCCTCCGCC GAGTTCGCCG ACCTGCGCCC CTGGCTCGCC TGGGACCGGG CCGAGGACCG GCTCACCCCG CGCCGGGGCG CGCCCATGGC GGTGCGCCTC AATGCCGGCA CCATCCCCGA CCGGGGCCTG TACGCCGTGC ACCTGGGCGG CGCCGACGGG CCGCGCCTGG GGGAGCTGGA CGAGGAGATG GTGTTCGAGA CCCGCGCCGG GGAGAACATC CTGCTGGGCG CCAGCACCTG GCGGGTGGAG GAGATCACCG GAGACCGGGT CATCGTCAGC CCCGCCCCGG GCGAGCCGGG CAAGCTGCCC TTCTGGCACG GCGACAGCCT GGGCCGCCCC GTGGAACTGG GCCGGCGCAT CGGCGCGCTC ACTGGGAAAC TGGGCGCCCT GAGCCAGGCC GAGGCGGCCC GCTGGCTGGA GGCACACACG CCGCTCTCCG CCTTCGCCGC CGGCAATCTC GCCGCCTACG TGCACGAGCA GAAGCAGCAC ACCGGCGTGC TGCCCACGGA CACCGCCATC ACCGTGGAGC GCTTCCGCGA CGAGCTGGGC GACTGGCGCG CCTGCATCCT CTCCCCCTTC GGCGCGCGCA TCCACGCCCC CTGGGGCATG GCCCTGCAGA ACCTGCTCTC GGCGCGAAGC GGCTTCGAGG TGCAGGTGAT GTACACCGAC GACGGCATCG TGCTGCGCTT CGCCGACACC GACGCCCTGC CCGACGCCGA CGAGCTGATA CCCGACCCCG AGGAGATCGA GGAACTGATC ACCGAACAGC TGGCCACCAC CGCCCTGTTC GCCGGCCTGT TCCGGGAAAA CGCCGCCCGG GCCCTGATGC TCACCCGCAA CCGTCCCGAG GGGCGCACAC CGCTGTGGGC CCAGCGCATG AAGTCCGCCC AGCTGCTGGC CACCGTGAGC CGCTATCCGG CCTTCCCCAT CGTGCTGGAG ACCTACCGCC AGGCGCTCTC GGACGTCTTC GATCTGGCGG GTCTCAAGGC CCTGCTGGCC GACATTCGCG CCCGCCGGGT GCGGGTGGAC GAGGTGGAGA CCCGCTCCGC CTCCCCCTTC GCCCGCTCCC TGGTGTTCGC CTACGTGGCC GCCTACATCT ACGAGCAGGA CGCGCCGCTG GCCGAACGCC GTGCCCAGGC GCTGACCCTG GACCGGGGCC TGCTCTCCGA GCTGCTGGGC CAGGCGGAGC TGCGGGAGCT GCTGGACGCG GAGGTCCTGG AGGAACTGGA GGCGGAGCTC GCCCACGAGA CGGACGAGAC CCGCGCCCGG GACGCCGACG AACTCCACGA CCTGCTGCGC CGACTGGGGG ATCAGCACCT CGATGAACTC GCCCGCCGCT GCACCGAAGA CCCGGCACCC TGGCTGGAGA CCCTGAAGCA CTCGGGCCGC GCCGCCGCCG TGCGCATCGC GGGCGAGCCC CGCTTCATCG CCGCCGAGGA TGCAGGGCTG TACCGGGATG CCCTGGGCGT CGCCCCGCCC CCCGGCCTGC CCGACGCCTT CCTCGTGCCC GTGCCCGACG CCCTGGAACA GCTGCTGCGC CGCTTCGCCC GCACCCGCGG GCCATTCGTG ACGAAACAGG CCGCCGCACG CTTCGGCCTC ACCGAGGCCC AGGTGATCCC GGTGCTGCGC GCCCTGCTCA CCGAGGGACG CCTGGTGCAG GGGGAACTGC GCCCGGGCGG GCGCGAGCCC GAATGGTGCG ACGTGGACAT CCTGCGGCGC CTCAAGCGCC GGACGCTGGC CAGCCTGCGT CACCAGGCCG CCCCGGTGGA GGCCCGGGCG CTGGCCCGCT TCCTGCCCGA GTGGCACGGC ATCACCCGGG AGACTGGACA ACGCCACGGG GGCGCGGCGC GGCTCATGGA CGTGGTGGCG CAACTAGAAG GCCTGCCCCT GCCCTGGTCC CTGCTCGCCG AGGTGATCCT GCCCGCCCGG GTGAGCGGCT TCACCCTGGA GATGCTGGAC ATGGCCGCCG CCACCGGGCA GGTGGTGTGG GTGGGCACCG GGGCCCAGGG ACCGCGGGAC GGGCGGGTGG CCCTGTACCG GCGCGAGCGC GCCCCGCTGC TGTTGCCGCC CGCCGGCGAT CTGCCCGACG GACCCCTGCA CCGCACCCTG CTGGAACACC TGGACAGGCG CGGCGCAAGT TTCTACCTGG AACTGGAAAC CGCCGTGCAG CGGGCCCACC CGGAGGCCAA CGCCGCCGAC TTTCGCGCCG CCCTCTGGGA CCTGGTCTGG GCAGGGGCCA TCACCAACGA CACCTTCGCG CCCCTGCGGG CCCTGGCACG CGGTCCCTCG AAATCCACCG GCCGCAGTAC CCGGCGCGGC GGGCAGGCGC TGGCCGGCGG GCGCTGGTCA CGGGTGAGCG AGCTGCGCGA TCCGACCGTG AGCGACACCG AACAGGCCGT GGCCCGGGCC GAGATGCTGC TGGAGCGCTA CGGCATCGTC AGCCGCGAGG CGGCGCTGGC CGAGAACCTG CCCGGCGGCT TCGGCGCCGT CTATGGCGTG CTCCGCGCCA TGGAGGAGTC GGGCCGCATC CGCCGGGGCT ATTTCGTGGA GGGCCTGTCC GGCGCCCAGT TCGCCTGGGC CGGCAGCGTG GACCGCATCC GGGGCATCCG CCTGGAGGAC GACCCGCAGG CAGGCGGGGA GCCGGTGGCC CAGTGTCTCG CCGCCATGGA CCCCGCCAAT CCCTTCGGCA CTCTGCTCCC CTGGCCCGAG CCGGCCGGCG ACACGCGCCC CCGTCGCGTC CCCGGCGCCT GGGTGATACT CGTCGATGGC CTGCCGGTGC TCTACCTCGG ACCCGGCGGC AAGCACCTGG TGACCCTCGA CCAGGAACCC CATCGCCTGC GCGCCGCCTG CCGCGCCCTG CACCAGATCC CGCGCACCGG CCGGAGACGC CTGATGATCA TCGAACAGGT GGACGGCGTG CCAGTGAACG AGTCGCCCCA TGCGGGCATG CTGCTGGAAG CGGGATTCGT GCGGGACTAT CGGGGCTTCA GCAGGGCCTG A
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Protein sequence | MFSRPTHTWF SDNFTEPTPV QREGWARIAA GDHALLVAPT GSGKTLAAFL AGIDRLMQEA DDAKAGVRVL YVSPLKALVY DVERNLRAPL TGILRTAERL GEPARSLRVD MRTGDTPQAE RRAQLKDPAQ ILVTTPESLF LLLGSKAREN LRTVHTVIVD EVHALAPSKR GAHLALSLER LAEITDAEPQ RIGLSATVNP PELAARFLGG DREVAIVDTS AKPALDLHVE VPVADMEAVQ SPATTTPPGP KRGGSILGEL YAREVARPTP ERGIWPAMYP ALVAAIRSHR STLIFVNSRG LAERLTQRLN EVADEPLVLA HHGSVSHERR AEIEEGLKAG RLKGIVATSS LELGVDMGAV DLVILVESPG SVARGLQRVG RAGHQVGAVS RGLIYPKFRG DLLECAVVSE AMLEGLLEPI SVPRNPLDVL AQQLVAMVCD TPRTVSELEA LVRRTHPYRE LSRPLLEGVL DMLSGHYPSA EFADLRPWLA WDRAEDRLTP RRGAPMAVRL NAGTIPDRGL YAVHLGGADG PRLGELDEEM VFETRAGENI LLGASTWRVE EITGDRVIVS PAPGEPGKLP FWHGDSLGRP VELGRRIGAL TGKLGALSQA EAARWLEAHT PLSAFAAGNL AAYVHEQKQH TGVLPTDTAI TVERFRDELG DWRACILSPF GARIHAPWGM ALQNLLSARS GFEVQVMYTD DGIVLRFADT DALPDADELI PDPEEIEELI TEQLATTALF AGLFRENAAR ALMLTRNRPE GRTPLWAQRM KSAQLLATVS RYPAFPIVLE TYRQALSDVF DLAGLKALLA DIRARRVRVD EVETRSASPF ARSLVFAYVA AYIYEQDAPL AERRAQALTL DRGLLSELLG QAELRELLDA EVLEELEAEL AHETDETRAR DADELHDLLR RLGDQHLDEL ARRCTEDPAP WLETLKHSGR AAAVRIAGEP RFIAAEDAGL YRDALGVAPP PGLPDAFLVP VPDALEQLLR RFARTRGPFV TKQAAARFGL TEAQVIPVLR ALLTEGRLVQ GELRPGGREP EWCDVDILRR LKRRTLASLR HQAAPVEARA LARFLPEWHG ITRETGQRHG GAARLMDVVA QLEGLPLPWS LLAEVILPAR VSGFTLEMLD MAAATGQVVW VGTGAQGPRD GRVALYRRER APLLLPPAGD LPDGPLHRTL LEHLDRRGAS FYLELETAVQ RAHPEANAAD FRAALWDLVW AGAITNDTFA PLRALARGPS KSTGRSTRRG GQALAGGRWS RVSELRDPTV SDTEQAVARA EMLLERYGIV SREAALAENL PGGFGAVYGV LRAMEESGRI RRGYFVEGLS GAQFAWAGSV DRIRGIRLED DPQAGGEPVA QCLAAMDPAN PFGTLLPWPE PAGDTRPRRV PGAWVILVDG LPVLYLGPGG KHLVTLDQEP HRLRAACRAL HQIPRTGRRR LMIIEQVDGV PVNESPHAGM LLEAGFVRDY RGFSRA
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