Gene Tgr7_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0156 
Symbol 
ID7316162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp168851 
End bp173281 
Gene Length4431 bp 
Protein Length1476 aa 
Translation table11 
GC content73% 
IMG OID643615041 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_002512242 
Protein GI220933343 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCCC GCCCCACCCA CACCTGGTTC AGCGACAACT TCACCGAACC CACCCCCGTG 
CAGCGGGAGG GCTGGGCGCG CATCGCGGCC GGTGACCACG CCCTGCTGGT GGCCCCCACC
GGCAGCGGCA AGACACTCGC CGCCTTCCTC GCCGGCATCG ACCGGCTCAT GCAGGAGGCC
GACGATGCGA AAGCGGGCGT GCGCGTGCTC TACGTCTCGC CGCTGAAGGC CCTGGTCTAC
GACGTGGAGC GCAACCTGCG CGCGCCGCTC ACCGGCATCC TGCGCACCGC CGAGCGCCTG
GGCGAACCGG CGCGCAGCCT GCGCGTGGAC ATGCGCACCG GCGACACGCC CCAGGCCGAG
CGCCGGGCGC AGCTCAAGGA CCCGGCCCAG ATCCTGGTCA CCACCCCCGA ATCCCTGTTC
CTGCTGCTGG GCTCGAAGGC CCGGGAGAAC CTGCGCACGG TGCACACGGT GATCGTGGAC
GAGGTGCATG CCCTGGCCCC CAGCAAGCGC GGCGCCCATC TGGCCCTGTC CCTGGAACGT
CTCGCGGAGA TCACCGACGC CGAACCCCAG CGCATTGGTC TCTCCGCCAC CGTGAACCCG
CCGGAGCTGG CCGCCCGCTT CCTGGGCGGC GACCGCGAGG TGGCCATCGT CGACACCTCC
GCGAAACCCG CCCTGGACCT GCACGTGGAG GTGCCCGTGG CGGACATGGA GGCCGTACAG
TCGCCCGCCA CCACCACACC CCCGGGCCCG AAGCGGGGCG GCTCCATCCT GGGCGAGCTC
TACGCCCGGG AGGTGGCCAG GCCCACCCCC GAGCGGGGCA TCTGGCCCGC CATGTACCCG
GCGCTGGTGG CGGCCATCCG CAGCCATCGC TCCACCCTCA TCTTCGTCAA CAGCCGGGGC
CTGGCCGAAC GACTGACCCA AAGACTCAAT GAAGTCGCCG ACGAACCCCT GGTCCTCGCC
CACCACGGCA GTGTCTCCCA CGAGCGCCGC GCCGAGATCG AGGAGGGTCT CAAGGCGGGT
CGCCTCAAGG GCATCGTCGC CACCAGTTCG CTGGAACTGG GCGTGGACAT GGGCGCGGTG
GATCTGGTCA TCCTGGTGGA GTCCCCCGGC AGCGTCGCCC GGGGCCTGCA ACGGGTGGGC
CGCGCCGGGC ACCAGGTGGG CGCGGTGAGC CGCGGGCTCA TCTACCCCAA GTTCCGGGGC
GACCTGCTGG AATGCGCCGT GGTGAGCGAG GCCATGCTGG AGGGTCTGCT CGAACCCATC
AGCGTGCCCC GCAATCCCCT GGACGTGCTG GCCCAGCAAC TGGTGGCCAT GGTCTGCGAC
ACGCCGCGCA CGGTGAGCGA ACTGGAGGCC CTGGTGCGCC GCACCCACCC CTACCGGGAG
CTGTCCCGGC CGCTGCTGGA AGGGGTGCTT GACATGCTCT CCGGCCACTA CCCCTCCGCC
GAGTTCGCCG ACCTGCGCCC CTGGCTCGCC TGGGACCGGG CCGAGGACCG GCTCACCCCG
CGCCGGGGCG CGCCCATGGC GGTGCGCCTC AATGCCGGCA CCATCCCCGA CCGGGGCCTG
TACGCCGTGC ACCTGGGCGG CGCCGACGGG CCGCGCCTGG GGGAGCTGGA CGAGGAGATG
GTGTTCGAGA CCCGCGCCGG GGAGAACATC CTGCTGGGCG CCAGCACCTG GCGGGTGGAG
GAGATCACCG GAGACCGGGT CATCGTCAGC CCCGCCCCGG GCGAGCCGGG CAAGCTGCCC
TTCTGGCACG GCGACAGCCT GGGCCGCCCC GTGGAACTGG GCCGGCGCAT CGGCGCGCTC
ACTGGGAAAC TGGGCGCCCT GAGCCAGGCC GAGGCGGCCC GCTGGCTGGA GGCACACACG
CCGCTCTCCG CCTTCGCCGC CGGCAATCTC GCCGCCTACG TGCACGAGCA GAAGCAGCAC
ACCGGCGTGC TGCCCACGGA CACCGCCATC ACCGTGGAGC GCTTCCGCGA CGAGCTGGGC
GACTGGCGCG CCTGCATCCT CTCCCCCTTC GGCGCGCGCA TCCACGCCCC CTGGGGCATG
GCCCTGCAGA ACCTGCTCTC GGCGCGAAGC GGCTTCGAGG TGCAGGTGAT GTACACCGAC
GACGGCATCG TGCTGCGCTT CGCCGACACC GACGCCCTGC CCGACGCCGA CGAGCTGATA
CCCGACCCCG AGGAGATCGA GGAACTGATC ACCGAACAGC TGGCCACCAC CGCCCTGTTC
GCCGGCCTGT TCCGGGAAAA CGCCGCCCGG GCCCTGATGC TCACCCGCAA CCGTCCCGAG
GGGCGCACAC CGCTGTGGGC CCAGCGCATG AAGTCCGCCC AGCTGCTGGC CACCGTGAGC
CGCTATCCGG CCTTCCCCAT CGTGCTGGAG ACCTACCGCC AGGCGCTCTC GGACGTCTTC
GATCTGGCGG GTCTCAAGGC CCTGCTGGCC GACATTCGCG CCCGCCGGGT GCGGGTGGAC
GAGGTGGAGA CCCGCTCCGC CTCCCCCTTC GCCCGCTCCC TGGTGTTCGC CTACGTGGCC
GCCTACATCT ACGAGCAGGA CGCGCCGCTG GCCGAACGCC GTGCCCAGGC GCTGACCCTG
GACCGGGGCC TGCTCTCCGA GCTGCTGGGC CAGGCGGAGC TGCGGGAGCT GCTGGACGCG
GAGGTCCTGG AGGAACTGGA GGCGGAGCTC GCCCACGAGA CGGACGAGAC CCGCGCCCGG
GACGCCGACG AACTCCACGA CCTGCTGCGC CGACTGGGGG ATCAGCACCT CGATGAACTC
GCCCGCCGCT GCACCGAAGA CCCGGCACCC TGGCTGGAGA CCCTGAAGCA CTCGGGCCGC
GCCGCCGCCG TGCGCATCGC GGGCGAGCCC CGCTTCATCG CCGCCGAGGA TGCAGGGCTG
TACCGGGATG CCCTGGGCGT CGCCCCGCCC CCCGGCCTGC CCGACGCCTT CCTCGTGCCC
GTGCCCGACG CCCTGGAACA GCTGCTGCGC CGCTTCGCCC GCACCCGCGG GCCATTCGTG
ACGAAACAGG CCGCCGCACG CTTCGGCCTC ACCGAGGCCC AGGTGATCCC GGTGCTGCGC
GCCCTGCTCA CCGAGGGACG CCTGGTGCAG GGGGAACTGC GCCCGGGCGG GCGCGAGCCC
GAATGGTGCG ACGTGGACAT CCTGCGGCGC CTCAAGCGCC GGACGCTGGC CAGCCTGCGT
CACCAGGCCG CCCCGGTGGA GGCCCGGGCG CTGGCCCGCT TCCTGCCCGA GTGGCACGGC
ATCACCCGGG AGACTGGACA ACGCCACGGG GGCGCGGCGC GGCTCATGGA CGTGGTGGCG
CAACTAGAAG GCCTGCCCCT GCCCTGGTCC CTGCTCGCCG AGGTGATCCT GCCCGCCCGG
GTGAGCGGCT TCACCCTGGA GATGCTGGAC ATGGCCGCCG CCACCGGGCA GGTGGTGTGG
GTGGGCACCG GGGCCCAGGG ACCGCGGGAC GGGCGGGTGG CCCTGTACCG GCGCGAGCGC
GCCCCGCTGC TGTTGCCGCC CGCCGGCGAT CTGCCCGACG GACCCCTGCA CCGCACCCTG
CTGGAACACC TGGACAGGCG CGGCGCAAGT TTCTACCTGG AACTGGAAAC CGCCGTGCAG
CGGGCCCACC CGGAGGCCAA CGCCGCCGAC TTTCGCGCCG CCCTCTGGGA CCTGGTCTGG
GCAGGGGCCA TCACCAACGA CACCTTCGCG CCCCTGCGGG CCCTGGCACG CGGTCCCTCG
AAATCCACCG GCCGCAGTAC CCGGCGCGGC GGGCAGGCGC TGGCCGGCGG GCGCTGGTCA
CGGGTGAGCG AGCTGCGCGA TCCGACCGTG AGCGACACCG AACAGGCCGT GGCCCGGGCC
GAGATGCTGC TGGAGCGCTA CGGCATCGTC AGCCGCGAGG CGGCGCTGGC CGAGAACCTG
CCCGGCGGCT TCGGCGCCGT CTATGGCGTG CTCCGCGCCA TGGAGGAGTC GGGCCGCATC
CGCCGGGGCT ATTTCGTGGA GGGCCTGTCC GGCGCCCAGT TCGCCTGGGC CGGCAGCGTG
GACCGCATCC GGGGCATCCG CCTGGAGGAC GACCCGCAGG CAGGCGGGGA GCCGGTGGCC
CAGTGTCTCG CCGCCATGGA CCCCGCCAAT CCCTTCGGCA CTCTGCTCCC CTGGCCCGAG
CCGGCCGGCG ACACGCGCCC CCGTCGCGTC CCCGGCGCCT GGGTGATACT CGTCGATGGC
CTGCCGGTGC TCTACCTCGG ACCCGGCGGC AAGCACCTGG TGACCCTCGA CCAGGAACCC
CATCGCCTGC GCGCCGCCTG CCGCGCCCTG CACCAGATCC CGCGCACCGG CCGGAGACGC
CTGATGATCA TCGAACAGGT GGACGGCGTG CCAGTGAACG AGTCGCCCCA TGCGGGCATG
CTGCTGGAAG CGGGATTCGT GCGGGACTAT CGGGGCTTCA GCAGGGCCTG A
 
Protein sequence
MFSRPTHTWF SDNFTEPTPV QREGWARIAA GDHALLVAPT GSGKTLAAFL AGIDRLMQEA 
DDAKAGVRVL YVSPLKALVY DVERNLRAPL TGILRTAERL GEPARSLRVD MRTGDTPQAE
RRAQLKDPAQ ILVTTPESLF LLLGSKAREN LRTVHTVIVD EVHALAPSKR GAHLALSLER
LAEITDAEPQ RIGLSATVNP PELAARFLGG DREVAIVDTS AKPALDLHVE VPVADMEAVQ
SPATTTPPGP KRGGSILGEL YAREVARPTP ERGIWPAMYP ALVAAIRSHR STLIFVNSRG
LAERLTQRLN EVADEPLVLA HHGSVSHERR AEIEEGLKAG RLKGIVATSS LELGVDMGAV
DLVILVESPG SVARGLQRVG RAGHQVGAVS RGLIYPKFRG DLLECAVVSE AMLEGLLEPI
SVPRNPLDVL AQQLVAMVCD TPRTVSELEA LVRRTHPYRE LSRPLLEGVL DMLSGHYPSA
EFADLRPWLA WDRAEDRLTP RRGAPMAVRL NAGTIPDRGL YAVHLGGADG PRLGELDEEM
VFETRAGENI LLGASTWRVE EITGDRVIVS PAPGEPGKLP FWHGDSLGRP VELGRRIGAL
TGKLGALSQA EAARWLEAHT PLSAFAAGNL AAYVHEQKQH TGVLPTDTAI TVERFRDELG
DWRACILSPF GARIHAPWGM ALQNLLSARS GFEVQVMYTD DGIVLRFADT DALPDADELI
PDPEEIEELI TEQLATTALF AGLFRENAAR ALMLTRNRPE GRTPLWAQRM KSAQLLATVS
RYPAFPIVLE TYRQALSDVF DLAGLKALLA DIRARRVRVD EVETRSASPF ARSLVFAYVA
AYIYEQDAPL AERRAQALTL DRGLLSELLG QAELRELLDA EVLEELEAEL AHETDETRAR
DADELHDLLR RLGDQHLDEL ARRCTEDPAP WLETLKHSGR AAAVRIAGEP RFIAAEDAGL
YRDALGVAPP PGLPDAFLVP VPDALEQLLR RFARTRGPFV TKQAAARFGL TEAQVIPVLR
ALLTEGRLVQ GELRPGGREP EWCDVDILRR LKRRTLASLR HQAAPVEARA LARFLPEWHG
ITRETGQRHG GAARLMDVVA QLEGLPLPWS LLAEVILPAR VSGFTLEMLD MAAATGQVVW
VGTGAQGPRD GRVALYRRER APLLLPPAGD LPDGPLHRTL LEHLDRRGAS FYLELETAVQ
RAHPEANAAD FRAALWDLVW AGAITNDTFA PLRALARGPS KSTGRSTRRG GQALAGGRWS
RVSELRDPTV SDTEQAVARA EMLLERYGIV SREAALAENL PGGFGAVYGV LRAMEESGRI
RRGYFVEGLS GAQFAWAGSV DRIRGIRLED DPQAGGEPVA QCLAAMDPAN PFGTLLPWPE
PAGDTRPRRV PGAWVILVDG LPVLYLGPGG KHLVTLDQEP HRLRAACRAL HQIPRTGRRR
LMIIEQVDGV PVNESPHAGM LLEAGFVRDY RGFSRA